Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11763 | Canola | nucleus | 54.27 | 57.9 |
| CDY27635 | Canola | nucleus | 56.45 | 57.5 |
| CDX90111 | Canola | nucleus | 53.05 | 57.4 |
| Bra032851.1-P | Field mustard | nucleus | 55.57 | 56.61 |
| CDX84901 | Canola | mitochondrion, nucleus | 56.01 | 56.4 |
| Bra010916.1-P | Field mustard | nucleus | 52.61 | 56.13 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 35.1 | 34.04 |
| PGSC0003DMT400045033 | Potato | nucleus | 32.93 | 33.3 |
| KRG97456 | Soybean | nucleus | 32.49 | 32.27 |
| KRH31435 | Soybean | nucleus | 32.32 | 32.18 |
| KRH42634 | Soybean | nucleus | 32.23 | 31.49 |
| Solyc05g014640.2.1 | Tomato | nucleus | 30.66 | 31.1 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 26.22 | 30.19 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 25.35 | 26.99 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 27.35 | 26.54 |
| Zm00001d041124_P002 | Maize | nucleus | 25.26 | 25.6 |
| Zm00001d041136_P002 | Maize | nucleus | 25.61 | 25.21 |
| KXG23347 | Sorghum | nucleus | 25.52 | 24.87 |
| Os12t0239000-01 | Rice | nucleus | 25.17 | 24.62 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 25.17 | 24.47 |
| Zm00001d023797_P004 | Maize | nucleus | 25.17 | 24.22 |
| TraesCSU01G135900.1 | Wheat | nucleus | 24.83 | 24.13 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 24.74 | 24.13 |
| Os12t0239200-01 | Rice | nucleus | 24.74 | 23.99 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 24.56 | 23.92 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 22.74 | 22.21 |
| AT3G08670.1 | Thale cress | mitochondrion | 10.45 | 21.16 |
| AT2G40070.1 | Thale cress | nucleus | 10.28 | 19.44 |
| AT2G38160.3 | Thale cress | nucleus | 5.4 | 19.38 |
| AT3G09000.1 | Thale cress | nucleus | 8.8 | 18.67 |
| AT5G01280.1 | Thale cress | mitochondrion, nucleus | 7.06 | 16.74 |
Protein Annotations
| MapMan:35.2 | EntrezGene:839678 | ProteinID:AAG50575.1 | ProteinID:AEE30884.1 | ArrayExpress:AT1G27850 | EnsemblPlantsGene:AT1G27850 |
| RefSeq:AT1G27850 | TAIR:AT1G27850 | RefSeq:AT1G27850-TAIR-G | EnsemblPlants:AT1G27850.1 | TAIR:AT1G27850.1 | Unigene:At.28172 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008150 | GO:GO:0016020 |
| RefSeq:NP_174106.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | UniProt:Q9C6N3 | UniParc:UPI000009EBB8 | SEG:seg |
Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
Coordinates
chr1:+:9698298..9703944
Molecular Weight (calculated)
124860.0 Da
IEP (calculated)
5.383
GRAVY (calculated)
-0.725
Length
1148 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.