Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P12380_001 | Banana | nucleus | 45.94 | 38.72 |
| GSMUA_Achr10P... | Banana | mitochondrion | 9.73 | 35.66 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 35.11 | 32.47 |
| TraesCSU01G135900.1 | Wheat | nucleus | 36.91 | 31.16 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 36.61 | 31.01 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 36.71 | 30.91 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 36.31 | 30.65 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 36.11 | 30.53 |
| KXG23347 | Sorghum | nucleus | 35.81 | 30.31 |
| Os12t0239200-01 | Rice | nucleus | 35.91 | 30.24 |
| Os12t0239000-01 | Rice | nucleus | 35.31 | 29.98 |
| PGSC0003DMT400045033 | Potato | nucleus | 33.9 | 29.78 |
| KRH31435 | Soybean | nucleus | 34.4 | 29.75 |
| Solyc05g014640.2.1 | Tomato | nucleus | 33.1 | 29.15 |
| Zm00001d023797_P004 | Maize | nucleus | 34.8 | 29.09 |
| KRG97456 | Soybean | nucleus | 33.5 | 28.89 |
| Zm00001d041136_P002 | Maize | nucleus | 33.7 | 28.82 |
| KRH42634 | Soybean | nucleus | 33.9 | 28.77 |
| Zm00001d041124_P002 | Maize | nucleus | 32.4 | 28.51 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 32.2 | 27.32 |
| Bra032851.1-P | Field mustard | nucleus | 29.79 | 26.35 |
| AT1G27850.1 | Thale cress | nucleus | 30.19 | 26.22 |
| CDX90111 | Canola | nucleus | 27.88 | 26.2 |
| CDY27635 | Canola | nucleus | 29.59 | 26.18 |
| Bra010916.1-P | Field mustard | nucleus | 28.08 | 26.02 |
| CDX84901 | Canola | mitochondrion, nucleus | 29.19 | 25.53 |
| CDY11763 | Canola | nucleus | 27.28 | 25.28 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 10.73 | 21.02 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 11.03 | 18.39 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 10.63 | 18.28 |
| GSMUA_Achr10P... | Banana | nucleus | 10.13 | 17.94 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 8.32 | 17.36 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 11.13 | 15.7 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 5.92 | 12.02 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P20960_001 | EnsemblPlants:GSMUA_Achr2T20960_001 | EnsemblPlantsGene:GSMUA_Achr2G20960_001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | SEG:seg |
| UniParc:UPI000296AB2C | UniProt:M0S9T7 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G20960_001]
Coordinates
chr2:-:20640668..20646227
Molecular Weight (calculated)
108599.0 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.735
Length
997 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPSPSSRRF PVREIRTEGF HTRGRSLESK FPLRAKDDDL VLFNEMQNRE RDNFLLHSSD DFDDSISKLK YFPNFKLGIT IPAQGESSDL LNADGEKHDY
101: DWLLTPPETP LFPSLDDDEP QPTNVSRGRI RSQPISISRT STSEKTSRTN RSSASPCRLS SSPTSSSSVT HSRTRPSSVP RSSPLPVPRS ATPSRRPSTP
201: PAKPSPLTQR SLTPTVRRMS TGSTGPAYSS TRGTSPVRTN RGNSSSPKLR GWQSNLPGFS TDAPPNLRTS LTDRSTSRVR GLSPASTNGT GSSKFRRQSI
301: SPSASRSASS SQNSERNPFS SISKPSVSTS CDDDTDSHAS VGVSPIAATR KYGAFANSRA VMFSKKPSRS SSASSVPKRS FDSALRQMDH HKTPQDMFRP
401: LLSSVPASTF YVGKTTNVHR PMFSRYSSLT TSSNTSSEHG ASVVPDLEDN DHDRSVLTGE LEKTQDPSFQ EEVFILDEIS EHIGNDTCSA KLQSGNDSDS
501: LNTAVACRGS HGAECSKIDS NETMSICLKC DRHFVVTDID VDVCEECSGT YGSIGSEEPR TIRVGNQGDR NDTMDPKVQP QIEIPELTEI RTGIEPCQHE
601: QSSEEVTHIS VDSGLFLLAN DKRDENLSEQ EVLIPAELYA PESSSNYESQ QSQPTPSQID QVDNSESTGI AVVLMNKSSS RKWPVVQGKA FSAANIFLAE
701: SSHGRDNINV MKHSLGRDSS SASSSLDMGS RGQTDGHILR QLSSTKRETQ DARGESHTGT QGLEAPIATP DSSSIEGNHT PSATGCQDDV ADIATHCSSV
801: ATLDEQNDMV GFQDLHDDCT SQMPNSVEDF QEDSISTSDK DVLISEVEPK IAEDPSSEEP IITVEAPRKI VQRSFTLEEA TDTILFCSSI VHDVAHKAAT
901: IAMEKESALY ESSYRAVTFM GNSVSNKKDL QKMATKNNHR SRKINRKKLA AANEMPSVEV RDNVKNSELA SCNAEALHTG ESVKPPKLES KCNCTVM
101: DWLLTPPETP LFPSLDDDEP QPTNVSRGRI RSQPISISRT STSEKTSRTN RSSASPCRLS SSPTSSSSVT HSRTRPSSVP RSSPLPVPRS ATPSRRPSTP
201: PAKPSPLTQR SLTPTVRRMS TGSTGPAYSS TRGTSPVRTN RGNSSSPKLR GWQSNLPGFS TDAPPNLRTS LTDRSTSRVR GLSPASTNGT GSSKFRRQSI
301: SPSASRSASS SQNSERNPFS SISKPSVSTS CDDDTDSHAS VGVSPIAATR KYGAFANSRA VMFSKKPSRS SSASSVPKRS FDSALRQMDH HKTPQDMFRP
401: LLSSVPASTF YVGKTTNVHR PMFSRYSSLT TSSNTSSEHG ASVVPDLEDN DHDRSVLTGE LEKTQDPSFQ EEVFILDEIS EHIGNDTCSA KLQSGNDSDS
501: LNTAVACRGS HGAECSKIDS NETMSICLKC DRHFVVTDID VDVCEECSGT YGSIGSEEPR TIRVGNQGDR NDTMDPKVQP QIEIPELTEI RTGIEPCQHE
601: QSSEEVTHIS VDSGLFLLAN DKRDENLSEQ EVLIPAELYA PESSSNYESQ QSQPTPSQID QVDNSESTGI AVVLMNKSSS RKWPVVQGKA FSAANIFLAE
701: SSHGRDNINV MKHSLGRDSS SASSSLDMGS RGQTDGHILR QLSSTKRETQ DARGESHTGT QGLEAPIATP DSSSIEGNHT PSATGCQDDV ADIATHCSSV
801: ATLDEQNDMV GFQDLHDDCT SQMPNSVEDF QEDSISTSDK DVLISEVEPK IAEDPSSEEP IITVEAPRKI VQRSFTLEEA TDTILFCSSI VHDVAHKAAT
901: IAMEKESALY ESSYRAVTFM GNSVSNKKDL QKMATKNNHR SRKINRKKLA AANEMPSVEV RDNVKNSELA SCNAEALHTG ESVKPPKLES KCNCTVM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.