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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P02330_001 Banana cytosol 74.46 63.38
GSMUA_Achr10P... Banana nucleus 67.19 60.75
PGSC0003DMT400069903 Potato cytosol, nucleus, plastid 18.07 57.5
VIT_13s0067g00570.t01 Wine grape nucleus 58.94 55.05
PGSC0003DMT400059907 Potato plastid 18.27 53.14
Os01t0141900-01 Rice nucleus 59.33 49.84
EES02509 Sorghum nucleus 57.96 49.17
Zm00001d039901_P003 Maize nucleus 57.76 49.0
VIT_08s0007g02160.t01 Wine grape nucleus 51.87 48.18
KRH49356 Soybean nucleus 48.53 47.96
KRH00210 Soybean nucleus 47.94 47.38
KRG97756 Soybean nucleus 53.63 45.42
HORVU3Hr1G010470.4 Barley cytosol, nucleus 54.42 45.34
AT2G40070.1 Thale cress nucleus 53.83 45.14
Bra000164.1-P Field mustard nucleus 53.05 44.34
CDY07628 Canola nucleus 53.05 44.34
CDY60338 Canola nucleus 52.85 44.1
Bra004992.1-P Field mustard nucleus 50.49 43.63
Solyc03g096090.2.1 Tomato plastid 41.65 43.62
TraesCS3D01G054400.1 Wheat cytosol 54.03 43.58
PGSC0003DMT400021880 Potato nucleus 45.78 43.55
TraesCS3B01G067400.1 Wheat nucleus 54.03 43.51
CDY20509 Canola cytosol 51.28 43.43
CDX74811 Canola nucleus 49.9 43.2
KRH31123 Soybean nucleus 51.87 42.65
GSMUA_Achr5P28870_001 Banana cytosol 59.14 42.57
Solyc09g014490.2.1 Tomato nucleus 44.4 42.24
PGSC0003DMT400031157 Potato nucleus 12.38 40.65
TraesCS3A01G055100.2 Wheat cytosol 54.62 40.47
KRH14961 Soybean nucleus 52.06 39.67
CDY53090 Canola nucleus 39.1 39.02
PGSC0003DMT400069902 Potato cytosol 12.18 38.99
AT3G09000.1 Thale cress nucleus 41.06 38.63
PGSC0003DMT400031154 Potato nucleus 30.65 37.23
KRH73177 Soybean nucleus 50.49 37.14
Bra034046.1-P Field mustard nucleus 37.52 37.09
Bra029739.1-P Field mustard nucleus 38.31 36.86
CDY44674 Canola nucleus 38.11 36.67
CDY22176 Canola nucleus 37.13 36.63
AT2G38160.3 Thale cress nucleus 21.81 34.69
Bra028894.1-P Field mustard nucleus 33.79 33.99
CDY55901 Canola nucleus 33.79 33.99
AT5G01280.1 Thale cress mitochondrion, nucleus 32.22 33.88
CDY48118 Canola nucleus 33.6 33.79
CDX93325 Canola nucleus 20.24 31.02
GSMUA_Achr10P... Banana mitochondrion 14.34 26.84
CDY18403 Canola nucleus 19.25 25.65
Bra017135.1-P Field mustard nucleus 19.06 25.39
GSMUA_Achr3P09700_001 Banana cytosol 21.81 23.22
GSMUA_Achr6P25180_001 Banana cytosol 24.75 21.72
GSMUA_AchrUn_... Banana cytosol, mitochondrion, nucleus, plastid 15.52 16.09
GSMUA_Achr2P20960_001 Banana nucleus 21.02 10.73
GSMUA_Achr3P17040_001 Banana nucleus 21.22 10.02
GSMUA_Achr6P12380_001 Banana nucleus 19.84 8.54
Protein Annotations
EnsemblPlants:GSMUA_Achr6P33750_001EnsemblPlants:GSMUA_Achr6T33750_001EnsemblPlantsGene:GSMUA_Achr6G33750_001PANTHER:PTHR31949PANTHER:PTHR31949:SF1SEG:seg
UniParc:UPI0002958995UniProt:M0TCG8MapMan:35.2:::
Description
retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G33750_001]
Coordinates
chr6:+:32690149..32700474
Molecular Weight (calculated)
53516.3 Da
IEP (calculated)
11.706
GRAVY (calculated)
-0.797
Length
509 amino acids
Sequence
(BLAST)
001: MNRSLRAAVA PSPGRTMTKQ ADEELALFLE MRKLEKEQNN LLLHSTAELD PPLGSKPGTA PIFKIASSAP AREAGIGDFL NSDSEKNDYD WLLTPPGTPL
101: FPSLDTESKR SPVSSTGTPK NRSTLQKSRL ANAPDPSRNA ASRQPTTSSG LNSSTVGTRR PSSSGGPTHS ASRPVTPNGR PTLTAASKPT RASTPTSRNA
201: LPSKSCAPPP RSSTPVRYST QTSRSSVPAA SKTASRSATP TRRPSAISAV PSSSAPSSRS SSVARSGSTV SKGSTPCGSS SAIKPRSLKP SCTPGSSHDA
301: PSNSHTSLPE RPSASRGRPG APNIRSSSVE PGPNVRPRRQ SCSPSRGRVP NGNVHKGSSV PPSSRPHANA NDNMNPVLIG NKMVERIVNM RRLVPPKQDD
401: QRSSHNNLSG KSSLTPDSTG FGRTLSKKSL DMALRHMDIR RSVPNSSRPS MTNVPALSVY VRSGPTRSRT VGVSDSPLAT SSTASSEHSV NNNTICLDGN
501: EIEDDLTKQ
Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)
001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR
Arabidopsis Description
At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.