CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31123	Soybean	nucleus	85.86	83.36
VIT_13s0067g00570.t01	Wine grape	nucleus	65.56	72.29
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	17.8	66.88
PGSC0003DMT400059907	Potato	plastid	18.8	64.57
Bra004992.1-P	Field mustard	nucleus	59.9	61.12
CDY07628	Canola	nucleus	61.9	61.08
Bra000164.1-P	Field mustard	nucleus	61.56	60.76
CDY60338	Canola	nucleus	61.4	60.49
AT2G40070.1	Thale cress	nucleus	61.06	60.46
PGSC0003DMT400069902	Potato	cytosol	15.81	59.75
CDX74811	Canola	nucleus	58.24	59.52
CDY20509	Canola	cytosol	58.57	58.57
KRH14961	Soybean	nucleus	62.23	55.99
Solyc03g096090.2.1	Tomato	plastid	44.59	55.14
KRH00210	Soybean	nucleus	47.09	54.95
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	45.42	53.63
KRH49356	Soybean	nucleus	45.76	53.4
PGSC0003DMT400031157	Potato	nucleus	13.64	52.9
KRH73177	Soybean	nucleus	60.4	52.46
Os01t0141900-01	Rice	nucleus	52.25	51.82
EES02509	Sorghum	nucleus	50.75	50.83
GSMUA_Achr10P...	Banana	nucleus	47.42	50.62
Zm00001d039901_P003	Maize	nucleus	50.25	50.33
GSMUA_Achr8P02330_001	Banana	cytosol	49.42	49.67
PGSC0003DMT400031154	Potato	nucleus	33.44	47.97
TraesCS3D01G054400.1	Wheat	cytosol	49.92	47.54
TraesCS3B01G067400.1	Wheat	nucleus	49.75	47.31
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	47.92	47.14
TraesCS3A01G055100.2	Wheat	cytosol	49.58	43.38
GSMUA_Achr5P28870_001	Banana	cytosol	42.76	36.35
KRH40665	Soybean	nucleus	26.46	27.13
KRH00491	Soybean	mitochondrion, nucleus	25.62	26.32
KRH09557	Soybean	mitochondrion	21.63	26.26
KRH64866	Soybean	cytosol	18.8	24.89
KRH31435	Soybean	nucleus	20.63	10.75
KRG97456	Soybean	nucleus	19.8	10.29
KRH42634	Soybean	nucleus	19.8	10.13
KRH58738	Soybean	nucleus	12.65	8.74

Protein Annotations

EMBL:ACUP02010814	EnsemblPlants:KRG97756	EnsemblPlantsGene:GLYMA_18G028700	EntrezGene:100783818	ncoils:Coil	PANTHER:PTHR31949
PANTHER:PTHR31949:SF1	ProteinID:KRG97756	ProteinID:KRG97756.1	SEG:seg	UniParc:UPI000233E586	UniProt:I1MZ36
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:2163280..2168750

Molecular Weight (calculated)

63712.9 Da

IEP (calculated)

11.857

GRAVY (calculated)

-0.752

Length

601 amino acids

Sequence
(BLAST)

001: MNRSFRAQES QMLAALKQRE QQFGGLRASV MKEKEEELAL FLEMKKREKE RNDLLLNSSE EFDAPLGSNG GANPIFNISS STPAPVRKTG VDDFLNSEND
101: KNDYDWLLTP PGTPLFPSLE MESRKTVMSQ LGTPTTRPVA LKSRLANHQS EPAGRTNLVS KQPTSSPGLS SSSGGTRRPS SSGGPGSRPA TPTGRPTLTT
201: SSKSSRPSTP TLTAASKSSR SATPTRSMVT SKTTTSTIKP AVSATKHLAS ATKTPVPATK PAIPSRSSTP LSRSAARSST PTSRPTLPPS RPTSRATTPT
301: RRPSLSSNEP SIYASSVKAS SSPKPASVTS RQPTPVTVRK QAPVNSRQPA SPSRGTSPTV RSRPWKPSEM PGFSLDAPPN LRTTLPDRPL SATRGRPGAP
401: TSRSSSVEPS SSGRPRRQSC SPSRGRASNG SVHISGNSMP AVSRGHSKVN DNVSPVVMGT KMVERVINMR KLVPPMIEDK NSPRSNLSGK SASSPDSSGF
501: GRTLSKKSLD MAIRHMDIRR TIPGNLRPLM TNIPASSLYS VRSGSHHGRT ISVSGSPHAT SSNASSELSV NQNGICLDSS EVDDDIGSER CGQSPASVRG
601: R

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.