Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G067400.1 | Wheat | nucleus | 98.42 | 98.26 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 84.63 | 87.4 |
| TraesCS3A01G055100.2 | Wheat | cytosol | 85.42 | 78.46 |
| EES02509 | Sorghum | nucleus | 72.58 | 76.33 |
| Os01t0141900-01 | Rice | nucleus | 73.22 | 76.24 |
| Zm00001d039901_P003 | Maize | nucleus | 71.32 | 75.0 |
| PGSC0003DMT400069903 | Potato | cytosol, nucleus, plastid | 14.42 | 56.88 |
| PGSC0003DMT400059907 | Potato | plastid | 15.06 | 54.29 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 43.58 | 54.03 |
| VIT_13s0067g00570.t01 | Wine grape | nucleus | 45.01 | 52.11 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 48.81 | 51.51 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 44.22 | 50.91 |
| GSMUA_Achr10P... | Banana | nucleus | 45.32 | 50.8 |
| KRG97756 | Soybean | nucleus | 47.54 | 49.92 |
| CDX74811 | Canola | nucleus | 45.32 | 48.64 |
| Bra004992.1-P | Field mustard | nucleus | 45.32 | 48.56 |
| KRH00210 | Soybean | nucleus | 38.99 | 47.77 |
| CDY20509 | Canola | cytosol | 45.48 | 47.75 |
| CDY07628 | Canola | nucleus | 45.96 | 47.62 |
| Bra000164.1-P | Field mustard | nucleus | 45.96 | 47.62 |
| KRH31123 | Soybean | nucleus | 46.59 | 47.5 |
| AT2G40070.1 | Thale cress | nucleus | 45.48 | 47.28 |
| CDY60338 | Canola | nucleus | 45.64 | 47.21 |
| Solyc03g096090.2.1 | Tomato | plastid | 35.97 | 46.71 |
| KRH49356 | Soybean | nucleus | 38.03 | 46.6 |
| CDY53090 | Canola | nucleus | 35.34 | 43.73 |
| KRH14961 | Soybean | nucleus | 45.8 | 43.26 |
| Bra029739.1-P | Field mustard | nucleus | 35.02 | 41.78 |
| CDY44674 | Canola | nucleus | 35.02 | 41.78 |
| Bra034046.1-P | Field mustard | nucleus | 34.07 | 41.75 |
| CDY22176 | Canola | nucleus | 33.91 | 41.47 |
| AT3G09000.1 | Thale cress | nucleus | 35.5 | 41.4 |
| PGSC0003DMT400021880 | Potato | nucleus | 34.87 | 41.12 |
| KRH73177 | Soybean | nucleus | 44.06 | 40.17 |
| Solyc09g014490.2.1 | Tomato | nucleus | 33.6 | 39.63 |
| AT5G01280.1 | Thale cress | mitochondrion, nucleus | 30.11 | 39.26 |
| PGSC0003DMT400031154 | Potato | nucleus | 25.36 | 38.19 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 42.47 | 37.91 |
| CDY55901 | Canola | nucleus | 30.27 | 37.75 |
| Bra028894.1-P | Field mustard | nucleus | 30.27 | 37.75 |
| CDY48118 | Canola | nucleus | 30.11 | 37.55 |
| AT2G38160.3 | Thale cress | nucleus | 18.07 | 35.62 |
| PGSC0003DMT400069902 | Potato | cytosol | 8.72 | 34.59 |
| PGSC0003DMT400031157 | Potato | nucleus | 8.4 | 34.19 |
| CDX93325 | Canola | nucleus | 16.64 | 31.63 |
| Bra017135.1-P | Field mustard | nucleus | 16.01 | 26.44 |
| CDY18403 | Canola | nucleus | 15.69 | 25.92 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 21.39 | 24.46 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 15.69 | 8.41 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G054400.1 | EnsemblPlantsGene:TraesCS3D01G054400 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:+:22363953..22369184
Molecular Weight (calculated)
65511.2 Da
IEP (calculated)
12.064
GRAVY (calculated)
-0.812
Length
631 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRVAMADGG GGGRTLGAVI REKDEELALF LEMRRRDKER AGAAADMLLA GDGEDPDGDG LLLLDPSPPP PPPVVPAEPR AAPAPAYRMA GGFRRAPGGA
101: DDFLHSDAGD KSDYDWLLTP PGTPLFPSHE AAPKRSPVSQ TGSPKTRHNS LKSRLANHPD PPSRTTHPLR TSSSNSLNSA ATTRRPTSSG GPTSNSSRPS
201: TPTGRAASTT ASKGSRPSSP NARATLPAKT GPTAPRSSTP TSRSTLPSTR SALPSSRSTT PSRTSGPATA TRTSGPTAAT RTSGPATATR TSVPSGRASA
301: PASRSSTPTS RSSMPATRST TPLSRPSLPA QSKPASRSST PTRRSSAPPT HTQHSNLPGP VRSSSISRPG PTMPKSSASA ATTTAPAPSR GSSPTVKSRP
401: WKPSEMPGFS LDAPPNLRTS LPERPTSATR GRPGAPSSRS SSVEPGPAAR PKRQSCSPSR GRTSNGSVPS GSSMPAVRRS HLNGGDSVNP VQMGNKMVER
501: VVNMRRLAPP KHDDQRSSLN SLSGKSLNSP DSSGFGRSLS KKSLDMALRH MDIRRSIPNN LRPLMTSIPA SSVHSGRSGS TRGRPISVSD SPLATSSNAS
601: SEPSVNNNLM CFDSIDIDDE LCSDRAGHYA R
101: DDFLHSDAGD KSDYDWLLTP PGTPLFPSHE AAPKRSPVSQ TGSPKTRHNS LKSRLANHPD PPSRTTHPLR TSSSNSLNSA ATTRRPTSSG GPTSNSSRPS
201: TPTGRAASTT ASKGSRPSSP NARATLPAKT GPTAPRSSTP TSRSTLPSTR SALPSSRSTT PSRTSGPATA TRTSGPTAAT RTSGPATATR TSVPSGRASA
301: PASRSSTPTS RSSMPATRST TPLSRPSLPA QSKPASRSST PTRRSSAPPT HTQHSNLPGP VRSSSISRPG PTMPKSSASA ATTTAPAPSR GSSPTVKSRP
401: WKPSEMPGFS LDAPPNLRTS LPERPTSATR GRPGAPSSRS SSVEPGPAAR PKRQSCSPSR GRTSNGSVPS GSSMPAVRRS HLNGGDSVNP VQMGNKMVER
501: VVNMRRLAPP KHDDQRSSLN SLSGKSLNSP DSSGFGRSLS KKSLDMALRH MDIRRSIPNN LRPLMTSIPA SSVHSGRSGS TRGRPISVSD SPLATSSNAS
601: SEPSVNNNLM CFDSIDIDDE LCSDRAGHYA R
001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR
Arabidopsis Description
At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.