Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G121900.1 | Wheat | nucleus | 95.24 | 94.92 |
| TraesCSU01G135900.1 | Wheat | nucleus | 93.88 | 93.56 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 88.87 | 88.72 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 81.05 | 81.19 |
| Os12t0239200-01 | Rice | nucleus | 61.34 | 60.98 |
| KXG23347 | Sorghum | nucleus | 56.75 | 56.71 |
| Zm00001d023797_P004 | Maize | nucleus | 53.61 | 52.89 |
| Zm00001d041136_P002 | Maize | nucleus | 51.06 | 51.54 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 31.01 | 36.61 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 31.78 | 31.61 |
| KRH31435 | Soybean | nucleus | 29.99 | 30.62 |
| KRG97456 | Soybean | nucleus | 29.65 | 30.19 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 27.19 | 29.68 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 29.57 | 29.39 |
| PGSC0003DMT400045033 | Potato | nucleus | 28.21 | 29.25 |
| KRH42634 | Soybean | nucleus | 28.63 | 28.68 |
| Solyc05g014640.2.1 | Tomato | nucleus | 27.27 | 28.36 |
| CDY27635 | Canola | nucleus | 23.7 | 24.76 |
| AT1G27850.1 | Thale cress | nucleus | 24.13 | 24.74 |
| CDX84901 | Canola | mitochondrion, nucleus | 23.87 | 24.65 |
| CDY11763 | Canola | nucleus | 21.92 | 23.98 |
| Bra032851.1-P | Field mustard | nucleus | 22.94 | 23.96 |
| Bra010916.1-P | Field mustard | nucleus | 21.75 | 23.79 |
| CDX90111 | Canola | nucleus | 21.41 | 23.75 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 7.65 | 16.3 |
| TraesCS3D01G054400.1 | Wheat | cytosol | 8.41 | 15.69 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G124400.1 | EnsemblPlantsGene:TraesCS5D01G124400 | ncoils:Coil | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF10 | SEG:seg |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:188824100..188833689
Molecular Weight (calculated)
128375.0 Da
IEP (calculated)
5.055
GRAVY (calculated)
-0.732
Length
1177 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPHSPSRRRS PSRESAHRRV NDFGNALPAK PKDDELTLFA DMQKTEIENF LLEPSEDFDE SISKLSFFPD VKLGINVPAR GESHDLLKVD GDKNDYEWLL
0101: TPPETPLFRS LDDEEERSVG QASRGRAQSK AMQISRPSTM DNAQRSSRSS ASPNRLSLSP RSMARTKSPI SASRASPPLS VQPPTPSRRP STPPAAKILT
0201: LPQRSASPVS RRMSTGSSGS ALNGTRGASP VKANHRSSSP KPQGWQSNDP AFSYNAPPNL RTSLPDRSVS RSRGGSPTSF SGLDTGSRGR RQSMSPTPTR
0301: RASSSHSIER DRLSTHSKAS ATSSGDDDLD SMQSISIGYS SSPAVKKSLA VMKTRSIASS KKLSKNFSPI SAPKWSFDSA VWLMDHRKGP QDRFRPLLSS
0401: VPATTFGAGK INNVHKPMFS HNSSMTTSSN ASSEHGATFG PYVESDQEQQ DLIGEWEADD GLRVHEDIFM FDKLDELNEE TSFNKNTKYV EDSPIQVKYV
0501: KSDKHDFDME RWAANQTAYD GANSSQVGHG EMATCSRCGM SFNVMDLDGK GDSCEECSSK VGGFSADRML WTSEAHQHDN KIVNSGPYAE SEPSMAPDSV
0601: DYSKHASLGN QTVNNEPSAD CTEKCPPGQL MVDTDEDMLL GQEVVNHENM RPYHVSDSLL ENEDDISFSR SSVSNHQQTE PTSAEHGPYG GQMDSCNHGL
0701: PPCLSESNCQ HNEAVSETAF GDNSHQLGSN IHPFPKVESA GISVLLHQKS SSNKWPVMEG RALAATNIVC SEPYYTRDGI NMMKRSFGRD SSSASSIDLG
0801: SSRQSDARFE RHSSSKKGDI EKAQLSSTMS HQSIASVSDM SVSGSSASLC HQSDAIEDTC SRIDTLESSA SRTVVSTGED SSSKDALSNA LECLSTARPI
0901: VNDDIPVDLN SSSFDRSSET EDVISMGRMA DNDHSSTNMC LSEMEEPINV QESSAAEGSC MLKTDEDTSD TVQCCLAGTP EYPSEENLDN LIMQSQSEVV
1001: QDSIEEHILD DCCVSAISEE DVLVSRTGTS IIELPNDEKS PQAVEGSRKQ IQRCFTLEEA TDTILLCSSI VHDLAYKAAT IALEHEQESE CPRPTVTIIG
1101: KSIRDEDGFL KLPHRRTPNR KVKRKRLEGE TTTITETAEK ESVVEDPSPV RSASGITRAS DNMKPPKLES KCNCVIM
0101: TPPETPLFRS LDDEEERSVG QASRGRAQSK AMQISRPSTM DNAQRSSRSS ASPNRLSLSP RSMARTKSPI SASRASPPLS VQPPTPSRRP STPPAAKILT
0201: LPQRSASPVS RRMSTGSSGS ALNGTRGASP VKANHRSSSP KPQGWQSNDP AFSYNAPPNL RTSLPDRSVS RSRGGSPTSF SGLDTGSRGR RQSMSPTPTR
0301: RASSSHSIER DRLSTHSKAS ATSSGDDDLD SMQSISIGYS SSPAVKKSLA VMKTRSIASS KKLSKNFSPI SAPKWSFDSA VWLMDHRKGP QDRFRPLLSS
0401: VPATTFGAGK INNVHKPMFS HNSSMTTSSN ASSEHGATFG PYVESDQEQQ DLIGEWEADD GLRVHEDIFM FDKLDELNEE TSFNKNTKYV EDSPIQVKYV
0501: KSDKHDFDME RWAANQTAYD GANSSQVGHG EMATCSRCGM SFNVMDLDGK GDSCEECSSK VGGFSADRML WTSEAHQHDN KIVNSGPYAE SEPSMAPDSV
0601: DYSKHASLGN QTVNNEPSAD CTEKCPPGQL MVDTDEDMLL GQEVVNHENM RPYHVSDSLL ENEDDISFSR SSVSNHQQTE PTSAEHGPYG GQMDSCNHGL
0701: PPCLSESNCQ HNEAVSETAF GDNSHQLGSN IHPFPKVESA GISVLLHQKS SSNKWPVMEG RALAATNIVC SEPYYTRDGI NMMKRSFGRD SSSASSIDLG
0801: SSRQSDARFE RHSSSKKGDI EKAQLSSTMS HQSIASVSDM SVSGSSASLC HQSDAIEDTC SRIDTLESSA SRTVVSTGED SSSKDALSNA LECLSTARPI
0901: VNDDIPVDLN SSSFDRSSET EDVISMGRMA DNDHSSTNMC LSEMEEPINV QESSAAEGSC MLKTDEDTSD TVQCCLAGTP EYPSEENLDN LIMQSQSEVV
1001: QDSIEEHILD DCCVSAISEE DVLVSRTGTS IIELPNDEKS PQAVEGSRKQ IQRCFTLEEA TDTILLCSSI VHDLAYKAAT IALEHEQESE CPRPTVTIIG
1101: KSIRDEDGFL KLPHRRTPNR KVKRKRLEGE TTTITETAEK ESVVEDPSPV RSASGITRAS DNMKPPKLES KCNCVIM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.