Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g014640.2.1 | Tomato | nucleus | 73.04 | 73.23 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 47.22 | 45.27 |
| KRH42634 | Soybean | nucleus | 43.7 | 42.21 |
| KRG97456 | Soybean | nucleus | 42.38 | 41.61 |
| KRH31435 | Soybean | nucleus | 42.11 | 41.46 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 29.78 | 33.9 |
| CDY27635 | Canola | nucleus | 33.57 | 33.81 |
| AT1G27850.1 | Thale cress | nucleus | 33.3 | 32.93 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 34.27 | 32.88 |
| CDX84901 | Canola | mitochondrion, nucleus | 32.69 | 32.54 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 30.48 | 32.1 |
| Bra010916.1-P | Field mustard | nucleus | 30.13 | 31.78 |
| Bra032851.1-P | Field mustard | nucleus | 31.54 | 31.77 |
| PGSC0003DMT400031157 | Potato | nucleus | 4.32 | 31.61 |
| CDX90111 | Canola | nucleus | 27.93 | 29.88 |
| PGSC0003DMT400069902 | Potato | cytosol | 4.14 | 29.56 |
| CDY11763 | Canola | nucleus | 27.93 | 29.46 |
| Os12t0239000-01 | Rice | nucleus | 29.78 | 28.79 |
| Os12t0239200-01 | Rice | nucleus | 29.78 | 28.55 |
| Zm00001d041124_P002 | Maize | nucleus | 28.37 | 28.42 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 29.43 | 28.28 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 29.25 | 28.21 |
| KXG23347 | Sorghum | nucleus | 28.81 | 27.76 |
| TraesCSU01G135900.1 | Wheat | nucleus | 28.81 | 27.69 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 28.55 | 27.48 |
| Zm00001d041136_P002 | Maize | nucleus | 27.58 | 26.84 |
| Zm00001d023797_P004 | Maize | nucleus | 27.67 | 26.32 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.64 | 24.77 |
| PGSC0003DMT400031154 | Potato | nucleus | 8.11 | 21.96 |
| PGSC0003DMT400005965 | Potato | nucleus | 9.6 | 19.29 |
| PGSC0003DMT400021880 | Potato | nucleus | 8.19 | 17.38 |
| PGSC0003DMT400059907 | Potato | plastid | 2.38 | 15.43 |
| PGSC0003DMT400069903 | Potato | cytosol, nucleus, plastid | 1.94 | 13.75 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400045033 | EnsemblPlantsGene:PGSC0003DMG400017461 | EntrezGene:102586767 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0016020 | ncoils:Coil | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | PGSC:PGSC0003DMG400017461 | RefSeq:XP_006341749.1 |
| SEG:seg | UniParc:UPI000295E6E5 | UniProt:M1BGZ9 | MapMan:35.2 | : | : |
Description
Transposon protein [Source:PGSC_GENE;Acc:PGSC0003DMG400017461]
Coordinates
chr5:-:12087937..12096572
Molecular Weight (calculated)
123291.0 Da
IEP (calculated)
5.975
GRAVY (calculated)
-0.810
Length
1135 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPAMRCS PGRELRAENH KRGRSLESGI HLRDRDDDLS LFNEVQTRER DNFLLQSNDE IEDLFSTKLR YFSDYKLGIS IPARGESSDL LNAEGDKNDY
0101: DWLLTPPDTP LFPSLDDESH ETRPTNHEQR GRPRSQPISI SRSSTMDKSH RSSRGSASPN RLSPSPRSGY TADQSRGRPS STPHSSPPPN LRHSTPTRKP
0201: SPSPKKFSTP PPRSSTPTPR RLSTGSSGTA APSQVRGTSP VKTSRGNSAS PKIRAWQSNI PGFSLEAPPN LRTSLGDRPA SYVRGSSPAS RSGSRSGRQS
0301: MSPTASRSVS SSHSHDRDPF SSHSKGSVAS SGDDDIDSLQ SIPVSRSDRS GSRSISGFQN KKALGHPKKP ARVVSSSSAP KRSFDMAIRQ MDHKKSPQNM
0401: FRPLLSSVPS STFYAGKAST THHSIISRNS SITSSSNASS DQATTGLHDN EGSEQNQEDI GNDQVKTTYA DLQDEVFDLD KADSTSEDLG KQIYDRVSCS
0501: QLGDPDGDLR VDSLLVGSKI CSPHDKALEM VADVEFLNSN ASISHVNALE DAVLCSRCGQ WYYYTESFDG DLKLCQDCVH SEVQLCATPP LSSVAGENSP
0601: ETLTAILDRS VDGFESAGNS HDSSEATGNN RLAEYHHRLS PDEGEKAYMK SNVNEGVQSH QAMAQSPNAD ISSKLVQNAE KREGAGISVL LNRSSSGKGN
0701: IVQNRTLSAT NINYDDLSYV RDAVNNSLRS STGYGSASAS SSIDLGSTGH TETRFQRQLS GRKLDLENYR NQNDRKLQSS NSSLSGTSSH AVQTLSIVTS
0801: SLEESFETSA SADLQKNIEV AYVDREKELL HGENTKVDNL RAEVESDDNC RIASKSVDHT GSVPSVANFE EFSSYMNCEN LANSDNSVNV DPCDLISETR
0901: PIEEDVSNSS VDKVEIVASL NQSSLHAISE MEIENGHVGS LDLQSDVCSL HSESSIDELN EQFLHAASGD GNEILASVDR ADSIDHKDIV REESTVTLEG
1001: QGGNKPRSLT LEEATDTILF CSSIVHDLAY RAANIAIEKE NSVLLKDSRP TVTIVGKANS DRRDPHSRIS GRRNSKSSQK ARQKMEVDTK PPQSNTNTES
1101: DEKTDKSTTR IVGAPIKGDS LNPPKLESKC NCTIM
0101: DWLLTPPDTP LFPSLDDESH ETRPTNHEQR GRPRSQPISI SRSSTMDKSH RSSRGSASPN RLSPSPRSGY TADQSRGRPS STPHSSPPPN LRHSTPTRKP
0201: SPSPKKFSTP PPRSSTPTPR RLSTGSSGTA APSQVRGTSP VKTSRGNSAS PKIRAWQSNI PGFSLEAPPN LRTSLGDRPA SYVRGSSPAS RSGSRSGRQS
0301: MSPTASRSVS SSHSHDRDPF SSHSKGSVAS SGDDDIDSLQ SIPVSRSDRS GSRSISGFQN KKALGHPKKP ARVVSSSSAP KRSFDMAIRQ MDHKKSPQNM
0401: FRPLLSSVPS STFYAGKAST THHSIISRNS SITSSSNASS DQATTGLHDN EGSEQNQEDI GNDQVKTTYA DLQDEVFDLD KADSTSEDLG KQIYDRVSCS
0501: QLGDPDGDLR VDSLLVGSKI CSPHDKALEM VADVEFLNSN ASISHVNALE DAVLCSRCGQ WYYYTESFDG DLKLCQDCVH SEVQLCATPP LSSVAGENSP
0601: ETLTAILDRS VDGFESAGNS HDSSEATGNN RLAEYHHRLS PDEGEKAYMK SNVNEGVQSH QAMAQSPNAD ISSKLVQNAE KREGAGISVL LNRSSSGKGN
0701: IVQNRTLSAT NINYDDLSYV RDAVNNSLRS STGYGSASAS SSIDLGSTGH TETRFQRQLS GRKLDLENYR NQNDRKLQSS NSSLSGTSSH AVQTLSIVTS
0801: SLEESFETSA SADLQKNIEV AYVDREKELL HGENTKVDNL RAEVESDDNC RIASKSVDHT GSVPSVANFE EFSSYMNCEN LANSDNSVNV DPCDLISETR
0901: PIEEDVSNSS VDKVEIVASL NQSSLHAISE MEIENGHVGS LDLQSDVCSL HSESSIDELN EQFLHAASGD GNEILASVDR ADSIDHKDIV REESTVTLEG
1001: QGGNKPRSLT LEEATDTILF CSSIVHDLAY RAANIAIEKE NSVLLKDSRP TVTIVGKANS DRRDPHSRIS GRRNSKSSQK ARQKMEVDTK PPQSNTNTES
1101: DEKTDKSTTR IVGAPIKGDS LNPPKLESKC NCTIM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.