Factsheet for PGSC0003DMT400021880

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g014490.2.1	Tomato	nucleus	94.21	94.21
PGSC0003DMT400069903	Potato	cytosol, nucleus, plastid	14.02	46.88
PGSC0003DMT400059907	Potato	plastid	15.33	46.86
GSMUA_Achr6P33750_001	Banana	cytosol, mitochondrion	43.55	45.78
VIT_08s0007g02160.t01	Wine grape	nucleus	45.42	44.34
KRH00210	Soybean	nucleus	41.31	42.91
KRH49356	Soybean	nucleus	40.37	41.94
GSMUA_Achr10P...	Banana	nucleus	42.43	40.32
GSMUA_Achr8P02330_001	Banana	cytosol	44.11	39.46
EES02509	Sorghum	nucleus	43.55	38.83
Zm00001d039901_P003	Maize	nucleus	43.36	38.67
Os01t0141900-01	Rice	nucleus	43.74	38.61
HORVU3Hr1G010470.4	Barley	cytosol, nucleus	41.12	36.01
CDX93325	Canola	nucleus	22.06	35.54
AT2G38160.3	Thale cress	nucleus	21.12	35.31
TraesCS3D01G054400.1	Wheat	cytosol	41.12	34.87
TraesCS3B01G067400.1	Wheat	nucleus	41.12	34.81
CDY53090	Canola	nucleus	32.52	34.12
Bra029739.1-P	Field mustard	nucleus	33.64	34.03
CDY44674	Canola	nucleus	33.64	34.03
CDY22176	Canola	nucleus	32.34	33.53
Bra034046.1-P	Field mustard	nucleus	31.96	33.2
AT3G09000.1	Thale cress	nucleus	32.71	32.35
Bra028894.1-P	Field mustard	nucleus	30.28	32.02
CDY48118	Canola	nucleus	30.28	32.02
CDY55901	Canola	nucleus	30.28	32.02
PGSC0003DMT400031154	Potato	nucleus	24.86	31.74
TraesCS3A01G055100.2	Wheat	cytosol	40.75	31.73
PGSC0003DMT400031157	Potato	nucleus	8.6	29.68
PGSC0003DMT400069902	Potato	cytosol	8.79	29.56
AT5G01280.1	Thale cress	mitochondrion, nucleus	26.73	29.55
GSMUA_Achr5P28870_001	Banana	cytosol	37.76	28.57
CDY18403	Canola	nucleus	19.63	27.49
Bra017135.1-P	Field mustard	nucleus	19.63	27.49
PGSC0003DMT400005965	Potato	nucleus	25.23	23.89
PGSC0003DMT400045033	Potato	nucleus	17.38	8.19

Protein Annotations

EnsemblPlants:PGSC0003DMT400021880	EnsemblPlantsGene:PGSC0003DMG400008491	EntrezGene:102585147	PANTHER:PTHR31949	PANTHER:PTHR31949:SF1	PGSC:PGSC0003DMG400008491
RefSeq:XP_006366352.1	SEG:seg	UniParc:UPI0002965A13	UniProt:M1AFU4	MapMan:35.2	:

Description

ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008491]

Coordinates

chr9:+:151138..155609

Molecular Weight (calculated)

57104.3 Da

IEP (calculated)

10.779

GRAVY (calculated)

-0.876

Length

535 amino acids

Sequence
(BLAST)

001: MATSVQCRPQ ERTLGMVMKE VDEDLAMFLE MRRSEKDMND QLAKCNSEEL DQQLGSEVDF SSLSNGTSTK PANQDYLLNS ENDKNDYDWL LSPPQTPSNP
101: LPEMEEQNIP VYQIVTNSSS TGQDCKIKTD LSTISPEPKI SIEPDIVQPA NSLEGLHSMG QPDMSRSKSS SAGNGRPSSS GGKKATSTRS STPTGRPRSS
201: SSKPSRASTP TSRATLPSAK PVASTARSST PTRAAPRSST PTGRPSKPAA SKSASRSATP TRRPSAASSI PIVSVSGSRS SSSTKTGSTT LKKTAPSRGT
301: SPTVKSRPLK PLETPSLSRD SSVNSKTLVP KRPASASRGR PTAPGARYST TNGKPRRKSC SPSRGRATTA TILSNTTALL SKSRGYGIEN DDVNPVLIGT
401: QMVERVVNMR KLAPPKQDDN LSHENSSKKS LSRENSGFGR SFSKKSLDMA LRHMDIRRSV NGTLRPVLTR VSASSANSIR SSSTKNKTGS VSDSPLATSS
501: NASSEPSMNN SSNNINWSEP EDDNFGCERE LSSPR

Best Arabidopsis Sequence Match ( AT2G40070.1 )
(BLAST)

001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR

Arabidopsis Description

At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.