Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22176 | Canola | nucleus | 87.38 | 87.21 |
| AT3G09000.1 | Thale cress | nucleus | 71.26 | 67.84 |
| Bra029739.1-P | Field mustard | nucleus | 68.35 | 66.54 |
| Bra028894.1-P | Field mustard | nucleus | 40.39 | 41.11 |
| KRH00210 | Soybean | nucleus | 40.97 | 40.97 |
| KRH49356 | Soybean | nucleus | 40.58 | 40.58 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 41.75 | 39.23 |
| Zm00001d039901_P003 | Maize | nucleus | 44.27 | 38.0 |
| EES02509 | Sorghum | nucleus | 44.27 | 38.0 |
| Os01t0141900-01 | Rice | nucleus | 44.27 | 37.62 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 37.09 | 37.52 |
| Bra000164.1-P | Field mustard | nucleus | 44.27 | 37.44 |
| Bra004992.1-P | Field mustard | nucleus | 42.72 | 37.35 |
| GSMUA_Achr10P... | Banana | nucleus | 39.42 | 36.06 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 41.94 | 35.35 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 40.39 | 34.78 |
| TraesCS3D01G054400.1 | Wheat | cytosol | 41.75 | 34.07 |
| TraesCS3B01G067400.1 | Wheat | nucleus | 41.75 | 34.02 |
| TraesCS3A01G055100.2 | Wheat | cytosol | 42.72 | 32.02 |
| PGSC0003DMT400021880 | Potato | nucleus | 33.2 | 31.96 |
| Solyc09g014490.2.1 | Tomato | nucleus | 32.62 | 31.4 |
| Bra017135.1-P | Field mustard | nucleus | 20.0 | 26.96 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 34.95 | 25.46 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 27.38 | 24.91 |
| Bra001348.1-P | Field mustard | nucleus | 24.85 | 23.66 |
| Bra010916.1-P | Field mustard | nucleus | 19.42 | 9.29 |
| Bra032851.1-P | Field mustard | nucleus | 19.42 | 8.87 |
Protein Annotations
Description
AT3G09000 (E=7e-150) | proline-rich family protein
Coordinates
chrA01:-:27706212..27708142
Molecular Weight (calculated)
54885.3 Da
IEP (calculated)
11.861
GRAVY (calculated)
-0.760
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNHDRDEEL SMFLEMRRRE KEHRGESLLT GSDNVSINGA LTTAVSAALS GISETVSSQR YPLRRTAAEN FLYSENEKSD YDWLLTPPGT PQFEKESHRS
101: VMNQLEAPNS RPTVLKSRLG NCGEEMISRN NDKTQMSSAS GPSSVSGLRR PSSSCSSRST SRPSTPTTRS TSRPSTPTRR STTTTTLTTR PVTTTRASTS
201: RSSTPTSRAT LTAARATSST TAPRTTTSTG SARSATPTRS KTQPSSAPSK KPLSRPATPT RRPSTPTGPS IVSSKAPSRG TSPAPTVKSS RPQKPPEMPG
301: FSLEAPPNLR TTLSDRPVSA RGRPGVASAP GSRSSSIERG SGGMGHSRRQ SCSPSRGQAP IGNTNGSLPG ARVRGKANND SFSPVAMGNK MVERVVNMRK
401: LGPPRLTENC GGRGTLKSNS AFNTLGYGRN LSKSSIDMAL RHMDIRRGMT GNLRPLVTKV PASAMYSVRS RSTSVTNSPV ATSSTISSSE LMSVDNINIL
501: CLDGNDDLLS ERSFS
101: VMNQLEAPNS RPTVLKSRLG NCGEEMISRN NDKTQMSSAS GPSSVSGLRR PSSSCSSRST SRPSTPTTRS TSRPSTPTRR STTTTTLTTR PVTTTRASTS
201: RSSTPTSRAT LTAARATSST TAPRTTTSTG SARSATPTRS KTQPSSAPSK KPLSRPATPT RRPSTPTGPS IVSSKAPSRG TSPAPTVKSS RPQKPPEMPG
301: FSLEAPPNLR TTLSDRPVSA RGRPGVASAP GSRSSSIERG SGGMGHSRRQ SCSPSRGQAP IGNTNGSLPG ARVRGKANND SFSPVAMGNK MVERVVNMRK
401: LGPPRLTENC GGRGTLKSNS AFNTLGYGRN LSKSSIDMAL RHMDIRRGMT GNLRPLVTKV PASAMYSVRS RSTSVTNSPV ATSSTISSSE LMSVDNINIL
501: CLDGNDDLLS ERSFS
001: MLTHDRDEEL SLFLEMRRRE KEHRADSLLT GSDNVSINAT LTAAAAAALS GVSETASSQR YPLRRTAAEN FLYSENEKSD YDWLLTPPGT PQFEKESHRS
101: VMNQHDAPNS RPTVLKSRLG NCREDIVSGN NNKPQTSSSS VAGLRRPSSS GSSRSTSRPA TPTRRSTTPT TSTSRPVTTR ASNSRSSTPT SRATLTAARA
201: TTSTAAPRTT TTSSGSARSA TPTRSNPRPS SASSKKPVSR PATPTRRPST PTGPSIVSSK APSRGTSPSP TVNSLSKAPS RGTSPSPTLN SSRPWKPPEM
301: PGFSLEAPPN LRTTLADRPV SASRGRPGVA SAPGSRSGSI ERGGGPTSGG SGNARRQSCS PSRGRAPIGN TNGSLTGVRG RAKASNGGSG CDNLSPVAMG
401: NKMVERVVNM RKLGPPRLTE NGGRGSGKSS SAFNSLGYGR NLSKSSIDMA IRHMDIRRGM TGNLRPLVTK VPASSMYSVR SRPGSVSSSP VATSSTVSSS
501: DPSVDNINIL CLDGNEAEND DLLSERSYAA SPRNQYPKFT S
101: VMNQHDAPNS RPTVLKSRLG NCREDIVSGN NNKPQTSSSS VAGLRRPSSS GSSRSTSRPA TPTRRSTTPT TSTSRPVTTR ASNSRSSTPT SRATLTAARA
201: TTSTAAPRTT TTSSGSARSA TPTRSNPRPS SASSKKPVSR PATPTRRPST PTGPSIVSSK APSRGTSPSP TVNSLSKAPS RGTSPSPTLN SSRPWKPPEM
301: PGFSLEAPPN LRTTLADRPV SASRGRPGVA SAPGSRSGSI ERGGGPTSGG SGNARRQSCS PSRGRAPIGN TNGSLTGVRG RAKASNGGSG CDNLSPVAMG
401: NKMVERVVNM RKLGPPRLTE NGGRGSGKSS SAFNSLGYGR NLSKSSIDMA IRHMDIRRGM TGNLRPLVTK VPASSMYSVR SRPGSVSSSP VATSSTVSSS
501: DPSVDNINIL CLDGNEAEND DLLSERSYAA SPRNQYPKFT S
Arabidopsis Description
AT3g09000/T16O11_4 [Source:UniProtKB/TrEMBL;Acc:Q9S7V5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.