Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G054400.1 | Wheat | cytosol | 78.46 | 85.42 |
| TraesCS3B01G067400.1 | Wheat | nucleus | 78.46 | 85.28 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 71.76 | 80.69 |
| EES02509 | Sorghum | nucleus | 63.32 | 72.5 |
| Os01t0141900-01 | Rice | nucleus | 63.32 | 71.78 |
| Zm00001d039901_P003 | Maize | nucleus | 62.45 | 71.5 |
| PGSC0003DMT400069903 | Potato | cytosol, nucleus, plastid | 13.25 | 56.88 |
| PGSC0003DMT400059907 | Potato | plastid | 13.97 | 54.86 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 40.47 | 54.62 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 41.48 | 52.01 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 45.27 | 52.01 |
| VIT_13s0067g00570.t01 | Wine grape | nucleus | 41.19 | 51.93 |
| GSMUA_Achr10P... | Banana | nucleus | 41.05 | 50.09 |
| KRG97756 | Soybean | nucleus | 43.38 | 49.58 |
| CDX74811 | Canola | nucleus | 42.36 | 49.49 |
| CDY20509 | Canola | cytosol | 42.94 | 49.08 |
| Bra004992.1-P | Field mustard | nucleus | 42.07 | 49.07 |
| KRH00210 | Soybean | nucleus | 35.95 | 47.96 |
| AT2G40070.1 | Thale cress | nucleus | 42.36 | 47.94 |
| KRH49356 | Soybean | nucleus | 35.66 | 47.57 |
| KRH31123 | Soybean | nucleus | 42.65 | 47.33 |
| CDY07628 | Canola | nucleus | 41.78 | 47.13 |
| Bra000164.1-P | Field mustard | nucleus | 41.78 | 47.13 |
| CDY60338 | Canola | nucleus | 41.48 | 46.72 |
| Solyc03g096090.2.1 | Tomato | plastid | 32.9 | 46.5 |
| CDY53090 | Canola | nucleus | 32.75 | 44.12 |
| KRH14961 | Soybean | nucleus | 42.36 | 43.56 |
| Bra034046.1-P | Field mustard | nucleus | 32.02 | 42.72 |
| CDY22176 | Canola | nucleus | 31.73 | 42.25 |
| Bra029739.1-P | Field mustard | nucleus | 32.46 | 42.16 |
| CDY44674 | Canola | nucleus | 32.31 | 41.97 |
| AT3G09000.1 | Thale cress | nucleus | 33.04 | 41.96 |
| KRH73177 | Soybean | nucleus | 41.19 | 40.9 |
| PGSC0003DMT400021880 | Potato | nucleus | 31.73 | 40.75 |
| AT5G01280.1 | Thale cress | mitochondrion, nucleus | 28.24 | 40.08 |
| Solyc09g014490.2.1 | Tomato | nucleus | 30.86 | 39.63 |
| PGSC0003DMT400031154 | Potato | nucleus | 23.44 | 38.42 |
| CDY55901 | Canola | nucleus | 28.24 | 38.34 |
| Bra028894.1-P | Field mustard | nucleus | 28.24 | 38.34 |
| CDY48118 | Canola | nucleus | 28.09 | 38.14 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 38.57 | 37.48 |
| AT2G38160.3 | Thale cress | nucleus | 17.03 | 36.56 |
| PGSC0003DMT400031157 | Potato | nucleus | 7.86 | 34.84 |
| PGSC0003DMT400069902 | Potato | cytosol | 8.01 | 34.59 |
| CDX93325 | Canola | nucleus | 16.01 | 33.13 |
| Bra017135.1-P | Field mustard | nucleus | 15.28 | 27.49 |
| CDY18403 | Canola | nucleus | 14.99 | 26.96 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 19.65 | 24.46 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 19.51 | 21.9 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G055100.2 | EnsemblPlantsGene:TraesCS3A01G055100 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr3A:+:32115220..32119901
Molecular Weight (calculated)
71632.6 Da
IEP (calculated)
11.984
GRAVY (calculated)
-0.768
Length
687 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRVAMAEGG GAGGGRTLGA VIREKDEELA LFLEMRRRDK ERAGAAADML LAADGEDADA DGLLLLDPSP PPPPPQPPAG KDDEPRRTLP VRTRPDPCRG
101: FCCRFLPPLA KTLAYPFWSG FMGAEPRAAP APAYRMAGGF RRAPGGADDF LHSDAGDKSD YDWLLTPPGT PLFPSHEAAP KRSPVSQTGS PKTRQNSLKS
201: RLANHPDPPS RTTHPLRTTS SNSLNSAATT RRPTSSGGLT SNSSRPSTPT GRAASTATSK GSRPSSPNAR ATLPAKTAPT APRSSTPTSR STLPSTRSAL
301: PSSRSTTPSR TSGPATATRT SGPAAATRTS GPAAATRTSG PATATRTSVP SGRASAPASR SSTPTSRSSM PATRSTTPLS RPSLPAQSKP ASRSSTPTRR
401: SSAPPTHAQH SNLPGPVRSS SISRPGPTMP KSSALPATTT APAPSRGSSP TVKSRPWKPS EMPGFSLDAP PNLRTSLPER PTSATRGRPG APSSRSSSVE
501: PGPAARPKRQ SCSPSRGRTS NGSVPSGSSM PAVRRSHLNG GDSVNPVQMG NKMVERVVNM RRLAPPKHDD QRSSLNSLSG KSLNSPDSSG FGRSLSKKSL
601: DMALRHMDIR RSIPNNLRPL MTSIPASSVH SGRSGSTRGR PISVSDSPLA TSSNASSEPS VNNNLMCFDS IDIDDELCSD RAGHYAR
101: FCCRFLPPLA KTLAYPFWSG FMGAEPRAAP APAYRMAGGF RRAPGGADDF LHSDAGDKSD YDWLLTPPGT PLFPSHEAAP KRSPVSQTGS PKTRQNSLKS
201: RLANHPDPPS RTTHPLRTTS SNSLNSAATT RRPTSSGGLT SNSSRPSTPT GRAASTATSK GSRPSSPNAR ATLPAKTAPT APRSSTPTSR STLPSTRSAL
301: PSSRSTTPSR TSGPATATRT SGPAAATRTS GPAAATRTSG PATATRTSVP SGRASAPASR SSTPTSRSSM PATRSTTPLS RPSLPAQSKP ASRSSTPTRR
401: SSAPPTHAQH SNLPGPVRSS SISRPGPTMP KSSALPATTT APAPSRGSSP TVKSRPWKPS EMPGFSLDAP PNLRTSLPER PTSATRGRPG APSSRSSSVE
501: PGPAARPKRQ SCSPSRGRTS NGSVPSGSSM PAVRRSHLNG GDSVNPVQMG NKMVERVVNM RRLAPPKHDD QRSSLNSLSG KSLNSPDSSG FGRSLSKKSL
601: DMALRHMDIR RSIPNNLRPL MTSIPASSVH SGRSGSTRGR PISVSDSPLA TSSNASSEPS VNNNLMCFDS IDIDDELCSD RAGHYAR
001: MNRSFRAKES LLLDSAERQR QQLRASMMAE KDEELSLFLE MRRREKEQDN LLLNNNPDEF ETPLGSKHGT SPVFNISSGA PPSRKAAPDD FLNSEGDKND
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR
101: YEWLLTPPGT PLFPSLEMES HRTMMSQTGD SKSRPATLTS RLANSSTESA ARNHLTSRQQ TSSPGLSSSS GASRRPSSSG GPGSRPATPT GRSSTLTANS
201: KSSRPSTPTS RATVSSATRP SLTNSRSTVS ATTKPTPMSR STSLSSSRLT PTASKPTTST ARSAGSVTRS TPSTTTKSAG PSRSTTPLSR STARSSTPTS
301: RPTLPPSKTI SRSSTPTRRP IASASAATTT ANPTISQIKP SSPAPAKPMP TPSKNPALSR AASPTVRSRP WKPSDMPGFS LETPPNLRTT LPERPLSATR
401: GRPGAPSSRS GSVEPGGPPG GRPRRQSCSP SRGRAPMYSS GSSVPAVNRG YSKASDNVSP VMMGTKMVER VINMRKLAPP RSDDKGSPHG NLSAKSSSPD
501: SAGFGRTLSK KSLDMAIRHM DIRRTIPGNL RPLMTNIPAS SMYSVRSGHT RGRPMNVSDS SPLATSSNAS SEISVCNNNG ICLEASEKED DAGSERGCRS
601: PASLQGR
Arabidopsis Description
At2g40070 [Source:UniProtKB/TrEMBL;Acc:Q494P4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.