Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029739.1-P | Field mustard | nucleus | 99.81 | 99.81 |
| CDY53090 | Canola | nucleus | 73.53 | 76.27 |
| AT3G09000.1 | Thale cress | nucleus | 73.72 | 72.09 |
| CDY22176 | Canola | nucleus | 62.95 | 64.53 |
| CDY48118 | Canola | nucleus | 41.97 | 43.87 |
| CDY55901 | Canola | nucleus | 41.78 | 43.68 |
| KRH49356 | Soybean | nucleus | 41.78 | 42.91 |
| KRH00210 | Soybean | nucleus | 41.59 | 42.72 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 41.4 | 39.96 |
| CDX74811 | Canola | nucleus | 43.1 | 38.78 |
| CDY20509 | Canola | cytosol | 43.67 | 38.44 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 36.67 | 38.11 |
| Os01t0141900-01 | Rice | nucleus | 43.48 | 37.95 |
| Zm00001d039901_P003 | Maize | nucleus | 42.72 | 37.67 |
| EES02509 | Sorghum | nucleus | 42.72 | 37.67 |
| CDY60338 | Canola | nucleus | 42.16 | 36.56 |
| CDY07628 | Canola | nucleus | 41.78 | 36.29 |
| GSMUA_Achr10P... | Banana | nucleus | 38.56 | 36.23 |
| HORVU3Hr1G010470.4 | Barley | cytosol, nucleus | 41.21 | 35.68 |
| TraesCS3B01G067400.1 | Wheat | nucleus | 41.97 | 35.13 |
| TraesCS3D01G054400.1 | Wheat | cytosol | 41.78 | 35.02 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 38.75 | 34.28 |
| PGSC0003DMT400021880 | Potato | nucleus | 34.03 | 33.64 |
| Solyc09g014490.2.1 | Tomato | nucleus | 33.46 | 33.08 |
| TraesCS3A01G055100.2 | Wheat | cytosol | 41.97 | 32.31 |
| CDX93325 | Canola | nucleus | 20.23 | 32.23 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 34.78 | 26.03 |
| CDY00658 | Canola | nucleus | 25.71 | 25.19 |
| CDY18403 | Canola | nucleus | 18.15 | 25.13 |
| CDX73938 | Canola | nucleus | 25.52 | 25.0 |
| CDY27987 | Canola | nucleus | 26.09 | 22.66 |
| CDY35995 | Canola | nucleus | 25.52 | 22.24 |
| CDX90111 | Canola | nucleus | 17.77 | 8.86 |
| CDY11763 | Canola | nucleus | 17.96 | 8.83 |
| CDY27635 | Canola | nucleus | 17.77 | 8.34 |
| CDX84901 | Canola | mitochondrion, nucleus | 17.96 | 8.33 |
Protein Annotations
| EnsemblPlants:CDY44674 | EnsemblPlantsGene:GSBRNA2T00080650001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF1 | ProteinID:CDY44674 | ProteinID:CDY44674.1 |
| SEG:seg | UniParc:UPI0004EEFF77 | UniProt:A0A078I5B3 | MapMan:35.2 | : | : |
Description
BnaA05g29320DBnaA05g29320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5B3]
Coordinates
chrLK032599:+:26384..28838
Molecular Weight (calculated)
56150.3 Da
IEP (calculated)
11.896
GRAVY (calculated)
-0.868
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTHDRDEEL SMFLEMRRRD KERRGESLVT GSDSTSINGA LTTAAAAALS GVSETVSSQR YPLRRTAAEN FLYSENEKSD YDWLLTPPGT PQFEKESHRS
101: VMEQSEAPNS RPTNLKSRLG NCREDKPQMA SSSLAGLRRP SSSSSSRSTS RPSTPTRRST TPTTTTSTTR PVTTTRASNS RSSTPTSRAT LTAARATTSA
201: TAPRTTTSRS ATPTRTKTQP SSAPSKKPLS RSATPTRRSP TPTGPSIVSS KAPSRGTSPT PTPTGPSMVS SKAPSRGTSP TPTVKSSKPW KPREMPGFSL
301: EAPPNLRTSA SDRPVSATRG RPGVASAPGS RSNSIERGNG AASNGVGHAR RQSCSPSRGR APVGSNNGSL PGARGRGKAN NGDSPVAMGN KMVERVVNMR
401: KLGPPRLTES GGRGTAKSSS AFNSLGYGRN LSKSSIDMAL RHMDIRRGMT GNLRPLVTKV PASSMYSVRS RPNSVTNSPM ATSSTVSSSE PNLDNINILC
501: LDGNDAENDD LLSERSFSSP RDQFPKFTS
101: VMEQSEAPNS RPTNLKSRLG NCREDKPQMA SSSLAGLRRP SSSSSSRSTS RPSTPTRRST TPTTTTSTTR PVTTTRASNS RSSTPTSRAT LTAARATTSA
201: TAPRTTTSRS ATPTRTKTQP SSAPSKKPLS RSATPTRRSP TPTGPSIVSS KAPSRGTSPT PTPTGPSMVS SKAPSRGTSP TPTVKSSKPW KPREMPGFSL
301: EAPPNLRTSA SDRPVSATRG RPGVASAPGS RSNSIERGNG AASNGVGHAR RQSCSPSRGR APVGSNNGSL PGARGRGKAN NGDSPVAMGN KMVERVVNMR
401: KLGPPRLTES GGRGTAKSSS AFNSLGYGRN LSKSSIDMAL RHMDIRRGMT GNLRPLVTKV PASSMYSVRS RPNSVTNSPM ATSSTVSSSE PNLDNINILC
501: LDGNDAENDD LLSERSFSSP RDQFPKFTS
001: MLTHDRDEEL SLFLEMRRRE KEHRADSLLT GSDNVSINAT LTAAAAAALS GVSETASSQR YPLRRTAAEN FLYSENEKSD YDWLLTPPGT PQFEKESHRS
101: VMNQHDAPNS RPTVLKSRLG NCREDIVSGN NNKPQTSSSS VAGLRRPSSS GSSRSTSRPA TPTRRSTTPT TSTSRPVTTR ASNSRSSTPT SRATLTAARA
201: TTSTAAPRTT TTSSGSARSA TPTRSNPRPS SASSKKPVSR PATPTRRPST PTGPSIVSSK APSRGTSPSP TVNSLSKAPS RGTSPSPTLN SSRPWKPPEM
301: PGFSLEAPPN LRTTLADRPV SASRGRPGVA SAPGSRSGSI ERGGGPTSGG SGNARRQSCS PSRGRAPIGN TNGSLTGVRG RAKASNGGSG CDNLSPVAMG
401: NKMVERVVNM RKLGPPRLTE NGGRGSGKSS SAFNSLGYGR NLSKSSIDMA IRHMDIRRGM TGNLRPLVTK VPASSMYSVR SRPGSVSSSP VATSSTVSSS
501: DPSVDNINIL CLDGNEAEND DLLSERSYAA SPRNQYPKFT S
101: VMNQHDAPNS RPTVLKSRLG NCREDIVSGN NNKPQTSSSS VAGLRRPSSS GSSRSTSRPA TPTRRSTTPT TSTSRPVTTR ASNSRSSTPT SRATLTAARA
201: TTSTAAPRTT TTSSGSARSA TPTRSNPRPS SASSKKPVSR PATPTRRPST PTGPSIVSSK APSRGTSPSP TVNSLSKAPS RGTSPSPTLN SSRPWKPPEM
301: PGFSLEAPPN LRTTLADRPV SASRGRPGVA SAPGSRSGSI ERGGGPTSGG SGNARRQSCS PSRGRAPIGN TNGSLTGVRG RAKASNGGSG CDNLSPVAMG
401: NKMVERVVNM RKLGPPRLTE NGGRGSGKSS SAFNSLGYGR NLSKSSIDMA IRHMDIRRGM TGNLRPLVTK VPASSMYSVR SRPGSVSSSP VATSSTVSSS
501: DPSVDNINIL CLDGNEAEND DLLSERSYAA SPRNQYPKFT S
Arabidopsis Description
AT3g09000/T16O11_4 [Source:UniProtKB/TrEMBL;Acc:Q9S7V5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.