Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 92.42 | 99.12 |
| CDY27987 | Canola | nucleus | 88.47 | 88.18 |
| AT3G08670.1 | Thale cress | mitochondrion | 67.87 | 72.66 |
| CDX73938 | Canola | nucleus | 59.8 | 67.22 |
| CDY00658 | Canola | nucleus | 59.64 | 67.04 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 45.63 | 48.6 |
| PGSC0003DMT400005965 | Potato | nucleus | 43.16 | 46.37 |
| KRH00491 | Soybean | mitochondrion, nucleus | 44.65 | 46.32 |
| Solyc06g054690.2.1 | Tomato | nucleus | 43.0 | 46.28 |
| KRH40665 | Soybean | nucleus | 43.33 | 44.88 |
| KRH09557 | Soybean | mitochondrion | 30.31 | 37.17 |
| KRH64866 | Soybean | cytosol | 27.18 | 36.34 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 34.43 | 36.03 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 27.02 | 34.31 |
| Zm00001d038489_P001 | Maize | nucleus | 30.97 | 32.53 |
| KXG22223 | Sorghum | nucleus | 30.81 | 32.41 |
| Zm00001d043074_P001 | Maize | cytosol | 29.0 | 31.83 |
| TraesCS3D01G336100.1 | Wheat | nucleus | 28.5 | 31.34 |
| TraesCS3A01G342200.1 | Wheat | nucleus | 28.34 | 31.16 |
| HORVU3Hr1G080730.1 | Barley | nucleus | 28.17 | 31.09 |
| Zm00001d012515_P002 | Maize | nucleus | 28.17 | 31.03 |
| Zm00001d010620_P001 | Maize | nucleus | 29.49 | 31.02 |
| EES01661 | Sorghum | nucleus | 28.34 | 30.94 |
| Os05t0480600-01 | Rice | cytosol | 29.98 | 30.85 |
| TraesCS3B01G374300.1 | Wheat | nucleus | 27.84 | 30.62 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 30.15 | 29.9 |
| Os01t0819000-02 | Rice | nucleus | 28.17 | 29.53 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 29.32 | 27.94 |
| CDY22176 | Canola | nucleus | 23.06 | 27.13 |
| CDY53090 | Canola | nucleus | 21.91 | 26.08 |
| CDY44674 | Canola | nucleus | 22.24 | 25.52 |
| CDX74811 | Canola | nucleus | 24.71 | 25.51 |
| CDY48118 | Canola | nucleus | 21.25 | 25.49 |
| CDY55901 | Canola | nucleus | 21.09 | 25.3 |
| CDY20509 | Canola | cytosol | 24.88 | 25.12 |
| CDY07628 | Canola | nucleus | 25.04 | 24.96 |
| CDY60338 | Canola | nucleus | 24.88 | 24.75 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 19.28 | 23.83 |
| CDX93325 | Canola | nucleus | 11.53 | 21.08 |
| CDY18403 | Canola | nucleus | 11.2 | 17.8 |
| CDX90111 | Canola | nucleus | 19.77 | 11.31 |
| CDY27635 | Canola | nucleus | 19.28 | 10.38 |
| CDY11763 | Canola | nucleus | 18.29 | 10.32 |
| CDX84901 | Canola | mitochondrion, nucleus | 18.78 | 10.0 |
Protein Annotations
| EnsemblPlants:CDY35995 | EnsemblPlantsGene:GSBRNA2T00059557001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF2 | ProteinID:CDY35995 | ProteinID:CDY35995.1 |
| SEG:seg | UniParc:UPI0004EEB471 | UniProt:A0A078HC76 | MapMan:35.2 | : | : |
Description
BnaA05g29550DBnaA05g29550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HC76]
Coordinates
chrLK032364:+:337912..343025
Molecular Weight (calculated)
64781.3 Da
IEP (calculated)
11.510
GRAVY (calculated)
-0.743
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDEGKMNMH RDKLLESTIV RNSFSTYSLD SRLLSLCPSA TTMNRNLRES LAGGRNTPAI SQFRRGNISQ NGFSRDSDEN LDLFSKIRRS FPLASSDELP
101: DVSAKLGRLS VGSKPAPRGK GDDLLSSAEG GKNDYDWLLT PPGTPLGNDS HSSLAAPKIT PSARATSASK ASRLSVSQSE TSYHSTRPAR SSSVTRPSLS
201: TSQYTSFTSN RSPSSILNTS SASVSSYIRP SSPSSRSSSS ARPSTPTRTS SASRASTPSR IRPGSSSSSM DKPRPSLSSR PSTPTSRPQI TANSPNIVAS
301: RPNSRPLTPT RRTPSISSAS ATSGSNISTG RGGTNGRVTP SLSRPSSPGP RVRTTPQQPI VLADFPLDTP PNLRTSLQGR PISAGRSRPA AGSSITAKAS
401: PEPKGPLTRR NSSPVVTRGR LTETQGKGRY GGGNGLQHHM DAPEPRRISN VADVTSRRTL KTSSTVADNN NGLGRSFSKN SLDMAIRHMD IRNGKSNGCA
501: LSTTTLFPQS IRQASSKIQP IRSVNNLSDS ISSSSAENGN EATDGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL
601: PEPFGPL
101: DVSAKLGRLS VGSKPAPRGK GDDLLSSAEG GKNDYDWLLT PPGTPLGNDS HSSLAAPKIT PSARATSASK ASRLSVSQSE TSYHSTRPAR SSSVTRPSLS
201: TSQYTSFTSN RSPSSILNTS SASVSSYIRP SSPSSRSSSS ARPSTPTRTS SASRASTPSR IRPGSSSSSM DKPRPSLSSR PSTPTSRPQI TANSPNIVAS
301: RPNSRPLTPT RRTPSISSAS ATSGSNISTG RGGTNGRVTP SLSRPSSPGP RVRTTPQQPI VLADFPLDTP PNLRTSLQGR PISAGRSRPA AGSSITAKAS
401: PEPKGPLTRR NSSPVVTRGR LTETQGKGRY GGGNGLQHHM DAPEPRRISN VADVTSRRTL KTSSTVADNN NGLGRSFSKN SLDMAIRHMD IRNGKSNGCA
501: LSTTTLFPQS IRQASSKIQP IRSVNNLSDS ISSSSAENGN EATDGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL
601: PEPFGPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.