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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • extracellular 1
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043074_P001 Maize cytosol 86.69 87.16
Zm00001d012515_P002 Maize nucleus 82.37 83.12
TraesCS3B01G374300.1 Wheat nucleus 67.63 68.12
TraesCS3A01G342200.1 Wheat nucleus 67.63 68.12
TraesCS3D01G336100.1 Wheat nucleus 67.45 67.93
HORVU3Hr1G080730.1 Barley nucleus 66.55 67.27
Os01t0819000-02 Rice nucleus 69.6 66.84
KXG22223 Sorghum nucleus 63.67 61.35
GSMUA_Achr6P25180_001 Banana cytosol 42.45 40.69
VIT_08s0056g00640.t01 Wine grape nucleus 33.45 32.63
GSMUA_AchrUn_... Banana cytosol, mitochondrion, nucleus, plastid 28.6 32.38
KRH00491 Soybean mitochondrion, nucleus 33.81 32.14
KRH40665 Soybean nucleus 33.63 31.91
PGSC0003DMT400005965 Potato nucleus 32.37 31.86
Solyc06g054690.2.1 Tomato nucleus 32.19 31.74
KRH09557 Soybean mitochondrion 28.24 31.72
AT3G08670.1 Thale cress mitochondrion 32.19 31.57
KRH64866 Soybean cytosol 25.54 31.28
Bra029708.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 31.3 30.74
CDX73938 Canola nucleus 29.32 30.19
CDY00658 Canola nucleus 29.14 30.0
Bra001348.1-P Field mustard nucleus 28.96 29.76
CDY27987 Canola nucleus 31.12 28.41
CDY35995 Canola nucleus 30.94 28.34
EES02509 Sorghum nucleus 23.02 21.33
KXG23347 Sorghum nucleus 17.63 8.32
OQU78994 Sorghum nucleus 8.99 8.21
Protein Annotations
EnsemblPlants:EES01661EnsemblPlantsGene:SORBI_3003G336800EntrezGene:8085394PANTHER:PTHR31949PANTHER:PTHR31949:SF5ProteinID:EES01661
ProteinID:EES01661.1RefSeq:XP_002456541.1SEG:segunigene:Sbi.1572UniParc:UPI0001A846E7UniProt:C5XN92
MapMan:35.2:::::
Description
hypothetical protein
Coordinates
chr3:+:66006019..66010775
Molecular Weight (calculated)
59066.4 Da
IEP (calculated)
11.999
GRAVY (calculated)
-0.767
Length
556 amino acids
Sequence
(BLAST)
001: MEDLLNTEIG KNDYDWLLTP PGTPRVPALD AAEKAPPSTV TKRTVNRSSS TTRASRLSTS ETENGHSTFP TRPARSISVS RRAVQSTPMS SNSRSSVLSA
101: NISSVSSRPT TPSKRTATLT ASKASVLSSR PVPTRSSTPV KARLSTPTNT RPSTPVKNRP SVSNSMTNSV VPKNMSAQSS RSSTPTSRSR TLSSSSSSST
201: SAVSRPSSSS GKVPAISRTS SSSSTVPSVS RSSSRSSTPT RQPVMRSSTP SAGRISGSNN MISNGRPLAS SGRSSAPSSA PSSRPSSPNT RTRAPVRPLD
301: IPDFPSDTPP NLRTKLPERP LSTGRVRPGI TSGVRSTPNA EPVLSAPVKK MSVPAITRSK FSDIQSKTSL TNGHQSRPSE RSLLDGQTTR TSRSVTAADN
401: GFGRTISRKS LDMAIRHMDI RQNLGGIRGT SLFPHSIRST TTKGRPARTS DPGHSVSNGD RYFTDNGSSN GHFSGDSSGA LSHNGGSSIG SPDRETFGTK
501: EVLSELDIYA NSRYEAMLLK EDTNNMSWLH NVDDKSDQSP VFDHRFEPLP EPFGPL
Best Arabidopsis Sequence Match ( AT3G08670.1 )
(BLAST)
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.