Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d043074_P001 | Maize | cytosol | 86.69 | 87.16 |
Zm00001d012515_P002 | Maize | nucleus | 82.37 | 83.12 |
TraesCS3B01G374300.1 | Wheat | nucleus | 67.63 | 68.12 |
TraesCS3A01G342200.1 | Wheat | nucleus | 67.63 | 68.12 |
TraesCS3D01G336100.1 | Wheat | nucleus | 67.45 | 67.93 |
HORVU3Hr1G080730.1 | Barley | nucleus | 66.55 | 67.27 |
Os01t0819000-02 | Rice | nucleus | 69.6 | 66.84 |
KXG22223 | Sorghum | nucleus | 63.67 | 61.35 |
GSMUA_Achr6P25180_001 | Banana | cytosol | 42.45 | 40.69 |
VIT_08s0056g00640.t01 | Wine grape | nucleus | 33.45 | 32.63 |
GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 28.6 | 32.38 |
KRH00491 | Soybean | mitochondrion, nucleus | 33.81 | 32.14 |
KRH40665 | Soybean | nucleus | 33.63 | 31.91 |
PGSC0003DMT400005965 | Potato | nucleus | 32.37 | 31.86 |
Solyc06g054690.2.1 | Tomato | nucleus | 32.19 | 31.74 |
KRH09557 | Soybean | mitochondrion | 28.24 | 31.72 |
AT3G08670.1 | Thale cress | mitochondrion | 32.19 | 31.57 |
KRH64866 | Soybean | cytosol | 25.54 | 31.28 |
Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.3 | 30.74 |
CDX73938 | Canola | nucleus | 29.32 | 30.19 |
CDY00658 | Canola | nucleus | 29.14 | 30.0 |
Bra001348.1-P | Field mustard | nucleus | 28.96 | 29.76 |
CDY27987 | Canola | nucleus | 31.12 | 28.41 |
CDY35995 | Canola | nucleus | 30.94 | 28.34 |
EES02509 | Sorghum | nucleus | 23.02 | 21.33 |
KXG23347 | Sorghum | nucleus | 17.63 | 8.32 |
OQU78994 | Sorghum | nucleus | 8.99 | 8.21 |
Protein Annotations
EnsemblPlants:EES01661 | EnsemblPlantsGene:SORBI_3003G336800 | EntrezGene:8085394 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF5 | ProteinID:EES01661 |
ProteinID:EES01661.1 | RefSeq:XP_002456541.1 | SEG:seg | unigene:Sbi.1572 | UniParc:UPI0001A846E7 | UniProt:C5XN92 |
MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:66006019..66010775
Molecular Weight (calculated)
59066.4 Da
IEP (calculated)
11.999
GRAVY (calculated)
-0.767
Length
556 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLLNTEIG KNDYDWLLTP PGTPRVPALD AAEKAPPSTV TKRTVNRSSS TTRASRLSTS ETENGHSTFP TRPARSISVS RRAVQSTPMS SNSRSSVLSA
101: NISSVSSRPT TPSKRTATLT ASKASVLSSR PVPTRSSTPV KARLSTPTNT RPSTPVKNRP SVSNSMTNSV VPKNMSAQSS RSSTPTSRSR TLSSSSSSST
201: SAVSRPSSSS GKVPAISRTS SSSSTVPSVS RSSSRSSTPT RQPVMRSSTP SAGRISGSNN MISNGRPLAS SGRSSAPSSA PSSRPSSPNT RTRAPVRPLD
301: IPDFPSDTPP NLRTKLPERP LSTGRVRPGI TSGVRSTPNA EPVLSAPVKK MSVPAITRSK FSDIQSKTSL TNGHQSRPSE RSLLDGQTTR TSRSVTAADN
401: GFGRTISRKS LDMAIRHMDI RQNLGGIRGT SLFPHSIRST TTKGRPARTS DPGHSVSNGD RYFTDNGSSN GHFSGDSSGA LSHNGGSSIG SPDRETFGTK
501: EVLSELDIYA NSRYEAMLLK EDTNNMSWLH NVDDKSDQSP VFDHRFEPLP EPFGPL
101: NISSVSSRPT TPSKRTATLT ASKASVLSSR PVPTRSSTPV KARLSTPTNT RPSTPVKNRP SVSNSMTNSV VPKNMSAQSS RSSTPTSRSR TLSSSSSSST
201: SAVSRPSSSS GKVPAISRTS SSSSTVPSVS RSSSRSSTPT RQPVMRSSTP SAGRISGSNN MISNGRPLAS SGRSSAPSSA PSSRPSSPNT RTRAPVRPLD
301: IPDFPSDTPP NLRTKLPERP LSTGRVRPGI TSGVRSTPNA EPVLSAPVKK MSVPAITRSK FSDIQSKTSL TNGHQSRPSE RSLLDGQTTR TSRSVTAADN
401: GFGRTISRKS LDMAIRHMDI RQNLGGIRGT SLFPHSIRST TTKGRPARTS DPGHSVSNGD RYFTDNGSSN GHFSGDSSGA LSHNGGSSIG SPDRETFGTK
501: EVLSELDIYA NSRYEAMLLK EDTNNMSWLH NVDDKSDQSP VFDHRFEPLP EPFGPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.