Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010620_P001 | Maize | nucleus | 79.76 | 79.9 |
| Os05t0480600-01 | Rice | cytosol | 68.86 | 67.46 |
| Zm00001d043074_P001 | Maize | cytosol | 61.94 | 64.74 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 67.82 | 64.05 |
| Zm00001d012515_P002 | Maize | nucleus | 59.86 | 62.79 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 65.74 | 59.65 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 42.73 | 42.59 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 34.6 | 35.09 |
| KRH00491 | Soybean | mitochondrion, nucleus | 35.29 | 34.87 |
| KRH40665 | Soybean | nucleus | 34.78 | 34.3 |
| AT3G08670.1 | Thale cress | mitochondrion | 33.39 | 34.04 |
| PGSC0003DMT400005965 | Potato | nucleus | 32.87 | 33.63 |
| Solyc06g054690.2.1 | Tomato | nucleus | 32.7 | 33.51 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 32.7 | 33.39 |
| CDX73938 | Canola | nucleus | 30.62 | 32.78 |
| CDY00658 | Canola | nucleus | 30.62 | 32.78 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 27.16 | 31.98 |
| KRH09557 | Soybean | mitochondrion | 27.34 | 31.92 |
| Bra001348.1-P | Field mustard | nucleus | 29.76 | 31.79 |
| KRH64866 | Soybean | cytosol | 24.74 | 31.5 |
| CDY27987 | Canola | nucleus | 32.7 | 31.03 |
| CDY35995 | Canola | nucleus | 32.53 | 30.97 |
| Zm00001d039901_P003 | Maize | nucleus | 23.53 | 22.67 |
| Zm00001d008599_P001 | Maize | cytosol | 4.67 | 14.92 |
| Zm00001d041124_P002 | Maize | nucleus | 17.99 | 9.18 |
| Zm00001d023797_P004 | Maize | nucleus | 17.65 | 8.55 |
| Zm00001d041136_P002 | Maize | nucleus | 16.61 | 8.23 |
Protein Annotations
| EMBL:BT054303 | EnsemblPlants:Zm00001d038489_P001 | EnsemblPlants:Zm00001d038489_T001 | EnsemblPlantsGene:Zm00001d038489 | EntrezGene:100281603 | PANTHER:PTHR31949 |
| PANTHER:PTHR31949:SF5 | ProteinID:AQK86735.1 | ProteinID:AQK86738.1 | ProteinID:AQK86740.1 | SEG:seg | UniParc:UPI00019174C8 |
| UniProt:B7ZYB1 | MapMan:35.2 | : | : | : | : |
Description
proline-rich family protein
Coordinates
chr6:-:158517969..158522683
Molecular Weight (calculated)
60872.1 Da
IEP (calculated)
12.145
GRAVY (calculated)
-0.835
Length
578 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLLGSEIG KNDYDWLLTP PGTPRVPALE GAEKTPSSNI LPKRTTTRSS STTRASRLSI SQTENGNSTI PTRPARSNSV SRSSIQSALM NGNNRTSVLN
101: TSISSVTSRP TTPSRRSSTV GTPKHSAPAA RPVPARSSTP VNTRPSTPAK TRPSTPTRTR PTAPNSSTDS AAAKTTFTHN ARPSTPNSRS RIVPNSSSSA
201: THVISRPSAS LSATSRPGSS SGNVPGISRA TSLSSSSVPS MSRSSSRSST PTRQPAIRSS APAIGRSPSV GRTSSINSFT TSSRSAASTG RNSAPSSAPS
301: SRPSSPNPRP RAPVRPLDIP DFPNETPPNL RTKLPERPPS AGRSRPGMAL GIRSTPNTEP SAASAPVKKI SVPAVSRSKF SDASSKTSTL TNGHQNRQAD
401: RSNIDSQANR PSRPSTGTTD NGFGRSISRR SLDMAIKHMD IRQNLGGIRG TSLFPQSIRS AAAKVRPARA SDPGHGISNG DQRYSDNGSS VNGHLSGDSN
501: GVLSRNGGSS TDSPDRGSIG TKETLSELDI YGSSRYEAML LREDVRNTNW LHGLDDKPDQ SPLFDHRFEP LPEPFSPL
101: TSISSVTSRP TTPSRRSSTV GTPKHSAPAA RPVPARSSTP VNTRPSTPAK TRPSTPTRTR PTAPNSSTDS AAAKTTFTHN ARPSTPNSRS RIVPNSSSSA
201: THVISRPSAS LSATSRPGSS SGNVPGISRA TSLSSSSVPS MSRSSSRSST PTRQPAIRSS APAIGRSPSV GRTSSINSFT TSSRSAASTG RNSAPSSAPS
301: SRPSSPNPRP RAPVRPLDIP DFPNETPPNL RTKLPERPPS AGRSRPGMAL GIRSTPNTEP SAASAPVKKI SVPAVSRSKF SDASSKTSTL TNGHQNRQAD
401: RSNIDSQANR PSRPSTGTTD NGFGRSISRR SLDMAIKHMD IRQNLGGIRG TSLFPQSIRS AAAKVRPARA SDPGHGISNG DQRYSDNGSS VNGHLSGDSN
501: GVLSRNGGSS TDSPDRGSIG TKETLSELDI YGSSRYEAML LREDVRNTNW LHGLDDKPDQ SPLFDHRFEP LPEPFSPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.