Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22223 | Sorghum | nucleus | 81.98 | 81.98 |
| Zm00001d038489_P001 | Maize | nucleus | 79.9 | 79.76 |
| Os05t0480600-01 | Rice | cytosol | 66.55 | 65.08 |
| Zm00001d043074_P001 | Maize | cytosol | 58.75 | 61.3 |
| TraesCS1A01G302000.1 | Wheat | nucleus | 64.12 | 60.46 |
| Zm00001d012515_P002 | Maize | nucleus | 56.85 | 59.53 |
| TraesCS1B01G311900.2 | Wheat | nucleus | 63.43 | 57.46 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 42.46 | 42.24 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 33.62 | 34.04 |
| PGSC0003DMT400005965 | Potato | nucleus | 32.76 | 33.45 |
| KRH00491 | Soybean | mitochondrion, nucleus | 33.8 | 33.33 |
| Solyc06g054690.2.1 | Tomato | nucleus | 32.58 | 33.33 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 28.25 | 33.2 |
| KRH40665 | Soybean | nucleus | 32.93 | 32.42 |
| Bra029708.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 31.2 | 31.8 |
| AT3G08670.1 | Thale cress | mitochondrion | 31.2 | 31.75 |
| CDY00658 | Canola | nucleus | 29.29 | 31.3 |
| CDX73938 | Canola | nucleus | 29.12 | 31.11 |
| KRH09557 | Soybean | mitochondrion | 26.34 | 30.71 |
| KRH64866 | Soybean | cytosol | 24.09 | 30.62 |
| Bra001348.1-P | Field mustard | nucleus | 28.6 | 30.5 |
| CDY35995 | Canola | nucleus | 31.02 | 29.49 |
| CDY27987 | Canola | nucleus | 30.85 | 29.23 |
| Zm00001d039901_P003 | Maize | nucleus | 24.44 | 23.5 |
| Zm00001d008599_P001 | Maize | cytosol | 4.85 | 15.47 |
| Zm00001d041124_P002 | Maize | nucleus | 17.16 | 8.74 |
| Zm00001d023797_P004 | Maize | nucleus | 16.46 | 7.96 |
| Zm00001d041136_P002 | Maize | nucleus | 15.42 | 7.63 |
Protein Annotations
| EMBL:BT068487 | EMBL:EU957644 | EnsemblPlants:Zm00001d010620_P001 | EnsemblPlants:Zm00001d010620_T001 | EnsemblPlantsGene:Zm00001d010620 | EntrezGene:100281719 |
| ncoils:Coil | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF5 | ProteinID:AQK94483.1 | SEG:seg | UniParc:UPI000182C1AC |
| UniProt:B6SY29 | MapMan:35.2 | : | : | : | : |
Description
proline-rich family protein
Coordinates
chr8:-:122052965..122057327
Molecular Weight (calculated)
60916.4 Da
IEP (calculated)
12.075
GRAVY (calculated)
-0.803
Length
577 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLLGSEIG KNDYDWLLTP PGTPRVPALE FAEETPSSNI LLKRTATRSS STTRASRLPV SQTENGHSMV PTRPTRSNSR PSIQSALMNG NNRTSVPNTS
101: ISSVTSRPTT PSRRSSTVVA PKQSVPAART VPARSSTPVK TRLSTPAKTR PSTPTSTRPT APNSSTDSSA AKTTSTHNVR PSTPNSRPRI VPNSSSGAAH
201: TISRPSASSS TTSRSGSSSG NVPGISRATS LSSSSIPSMS HSSSRSSTPT RQPAIRSSAP AIGRSPSVGR SSSINSFTSV SQSAASSGRN SAPSSAPSSR
301: PSSPNPRPRA PVRPLNIPDF PNEAPPNLRT KLPERPLSAG RSRPGMALGI RSTPNTEPSA ASAPMKKVSV SAVSRSKFSD ASSKTSTPTN GHQNRQAERS
401: TVDSQANRPS RPVTGTDNGF GRSISKRSLD MAIRHMDIRQ NLGGIRGASL FPQSTRSAAA KVRPARTSDP GHGISKGDQH RTDNGNSLNG HLYVSGDSNG
501: ALSRNGGSST GSPDRESIRT KETLIELDIY GSSRYEAMLL SEDLRNTSWL HGFDDKPDQS PLFDHRFEPL PEPFSPL
101: ISSVTSRPTT PSRRSSTVVA PKQSVPAART VPARSSTPVK TRLSTPAKTR PSTPTSTRPT APNSSTDSSA AKTTSTHNVR PSTPNSRPRI VPNSSSGAAH
201: TISRPSASSS TTSRSGSSSG NVPGISRATS LSSSSIPSMS HSSSRSSTPT RQPAIRSSAP AIGRSPSVGR SSSINSFTSV SQSAASSGRN SAPSSAPSSR
301: PSSPNPRPRA PVRPLNIPDF PNEAPPNLRT KLPERPLSAG RSRPGMALGI RSTPNTEPSA ASAPMKKVSV SAVSRSKFSD ASSKTSTPTN GHQNRQAERS
401: TVDSQANRPS RPVTGTDNGF GRSISKRSLD MAIRHMDIRQ NLGGIRGASL FPQSTRSAAA KVRPARTSDP GHGISKGDQH RTDNGNSLNG HLYVSGDSNG
501: ALSRNGGSST GSPDRESIRT KETLIELDIY GSSRYEAMLL SEDLRNTSWL HGFDDKPDQS PLFDHRFEPL PEPFSPL
001: MNRNLRESLA GGRNIPAISQ FRRGNNNNSN NISQNGFSRD SDENLDLFSK IRRSFPLASS DELPDVSAKL GRLSVGSKIA PKGKDDLLSS AEGGKNDYDW
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
101: LLTPPGTPLG NDSHSSLAAP KIASSARASS ASKASRLSVS QSESGYHSSR PARSSSVTRP SISTSQYSSF TSGRSPSSIL NTSSASVSSY IRPSSPSSRS
201: SSSARPSTPT RTSSASRSST PSRIRPGSSS SSMDKARPSL SSRPSTPTSR PQLSASSPNI IASRPNSRPS TPTRRSPSST SLSATSGPTI SGGRAASNGR
301: TGPSLSRPSS PGPRVRNTPQ QPIVLADFPL DTPPNLRTSL PDRPISAGRS RPVGGSSMAK ASPEPKGPIT RRNSSPIVTR GRLTETQGKG RFGGNGQHLT
401: DAPEPRRISN VSDITSRRTV KTSTTVTDNN NGLGRSFSKS SLDMAIRHMD IRNGKTNGCA LSTTTLFPQS IRPASSKIQP IRSGNNHSDS ISSNGTENGN
501: EANEGRRLMG KLSDMDMYES SRYDALLLKE DVKNTNWLHS IDDRSSDHGL MFDNGGFELL PEPFAPL
Arabidopsis Description
At3g08670 [Source:UniProtKB/TrEMBL;Acc:Q9C9Y9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.