Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045033 | Potato | nucleus | 73.23 | 73.04 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 44.52 | 42.57 |
| KRH31435 | Soybean | nucleus | 41.17 | 40.42 |
| KRG97456 | Soybean | nucleus | 40.55 | 39.71 |
| KRH42634 | Soybean | nucleus | 40.72 | 39.23 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 29.15 | 33.1 |
| CDY27635 | Canola | nucleus | 32.51 | 32.65 |
| CDX84901 | Canola | mitochondrion, nucleus | 32.77 | 32.54 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 32.86 | 31.45 |
| Bra010916.1-P | Field mustard | nucleus | 29.24 | 30.76 |
| AT1G27850.1 | Thale cress | nucleus | 31.1 | 30.66 |
| Bra032851.1-P | Field mustard | nucleus | 29.59 | 29.72 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 28.18 | 29.59 |
| CDX90111 | Canola | nucleus | 27.21 | 29.03 |
| CDY11763 | Canola | nucleus | 26.68 | 28.07 |
| Os12t0239000-01 | Rice | nucleus | 28.8 | 27.77 |
| Os12t0239200-01 | Rice | nucleus | 28.98 | 27.7 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 28.71 | 27.52 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 28.36 | 27.27 |
| Zm00001d041124_P002 | Maize | nucleus | 27.03 | 27.01 |
| TraesCSU01G135900.1 | Wheat | nucleus | 28.09 | 26.93 |
| KXG23347 | Sorghum | nucleus | 27.92 | 26.83 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 27.83 | 26.72 |
| Zm00001d041136_P002 | Maize | nucleus | 26.77 | 25.99 |
| Zm00001d023797_P004 | Maize | nucleus | 27.12 | 25.73 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 24.82 | 23.91 |
| Solyc06g054690.2.1 | Tomato | nucleus | 10.07 | 20.21 |
| Solyc09g014490.2.1 | Tomato | nucleus | 8.13 | 17.2 |
| Solyc03g096090.2.1 | Tomato | plastid | 6.71 | 15.64 |
Protein Annotations
| EnsemblPlants:Solyc05g014640.2.1 | EnsemblPlantsGene:Solyc05g014640.2 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | SEG:seg | UniParc:UPI00027666B3 | UniProt:K4BYI3 | MapMan:35.2 |
Description
No Description!
Coordinates
chr5:-:8629401..8637373
Molecular Weight (calculated)
122698.0 Da
IEP (calculated)
6.174
GRAVY (calculated)
-0.799
Length
1132 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPAMRCS PGRELRAENH KRGRSLESGI QLRDKDDDLA LFNEVQTRER DNFLLQSNDE IEDLFSTKLR YFSDYKLGIS IPARGESSDL LNAEGDKNDY
0101: DWLLTPPDTP LFPSLDDEIH ERRPTNHEQR GRPRSQPISI SRSSTMDKSH RSSRGSASPN RLSPSPRSSY TADQSRGRPS SAPHSSPPPN LRHSTPTRKP
0201: SPSPKKFSTP PPRSSTPTPR RLSTGSSGTA APSQVRGSSP VKTSRGNSAS PKIRAWQSNI PGFSLEAPPN LRTSLGDRPA SYVRGSSPAS RSGSRSGRQS
0301: MSPTASRSVS SSHSHDRDPF SSHSKGSVAS SGDDDLDSLQ SIPVSRSDRS GPRSISGFQN KKALGHSKKP TRVVSSSSAP KRSFDMAIRQ MDHRKSPQNM
0401: FRPLLSSVPS STFYAGKTST THHSIISRNS SITSSSNASS DQATTGLHDN EGIEQNQEDI GNDQVKTTYA DLQDEVFVLD KADSTSEDLG KQIYNRGSCS
0501: SLGDPDGDPR VDSLLVGSKI CSPHDKALEM VVDVEVLNSN ASVTRVNALE DAVLCSRCGQ WYYYTGSPDG DLKLCPDCVH SEVQLRATPP LSLVVGENSP
0601: ETLTAILDRS VDGFESAGNS HDSSEATGNN KLGDYHHRLS PDEGEKAYMK SNVNEGVQSH QPMAQSPNAD ISSKLVQNAE KREGAGISVL LNRSSSGKGN
0701: IVQNRTLSAT NINYDDLSYV RDAVNNSLRS STGYGSASAS SSIDLGSAGH TETRFQRQLS GRKLDLENYR NQNDRKLQSS NSSLSGISSH AVQTLSIVTS
0801: SLEESFETSA SADLQKNIEI AYVDREKEPL HGENTKVDNL CVEVESDDNC RIASKSVDHS GTVPSVANFE ESSSYMNCDN LANSDNSVNM DPCDLISETH
0901: PIEEDVSNTS VDKVEIVASL NQSSLHAISE LEIENGHVGS LDLQSDVCSL HSESSIDELN EQSLHAASGD GNEILASADS MDHKDIVREE STVTLEGQGG
1001: NKPRSLTLEE ATDTILFCSS IVHDLAYRAA NIAIEKEDSV LLKDSRPTVT IVGKANSDRR DPRGRISGRR NSKSSQKARQ KMEVDTKSPQ SKANTESDEK
1101: MDKSTTRIVG APIKGDSLNP PKLESKCNCT IM
0101: DWLLTPPDTP LFPSLDDEIH ERRPTNHEQR GRPRSQPISI SRSSTMDKSH RSSRGSASPN RLSPSPRSSY TADQSRGRPS SAPHSSPPPN LRHSTPTRKP
0201: SPSPKKFSTP PPRSSTPTPR RLSTGSSGTA APSQVRGSSP VKTSRGNSAS PKIRAWQSNI PGFSLEAPPN LRTSLGDRPA SYVRGSSPAS RSGSRSGRQS
0301: MSPTASRSVS SSHSHDRDPF SSHSKGSVAS SGDDDLDSLQ SIPVSRSDRS GPRSISGFQN KKALGHSKKP TRVVSSSSAP KRSFDMAIRQ MDHRKSPQNM
0401: FRPLLSSVPS STFYAGKTST THHSIISRNS SITSSSNASS DQATTGLHDN EGIEQNQEDI GNDQVKTTYA DLQDEVFVLD KADSTSEDLG KQIYNRGSCS
0501: SLGDPDGDPR VDSLLVGSKI CSPHDKALEM VVDVEVLNSN ASVTRVNALE DAVLCSRCGQ WYYYTGSPDG DLKLCPDCVH SEVQLRATPP LSLVVGENSP
0601: ETLTAILDRS VDGFESAGNS HDSSEATGNN KLGDYHHRLS PDEGEKAYMK SNVNEGVQSH QPMAQSPNAD ISSKLVQNAE KREGAGISVL LNRSSSGKGN
0701: IVQNRTLSAT NINYDDLSYV RDAVNNSLRS STGYGSASAS SSIDLGSAGH TETRFQRQLS GRKLDLENYR NQNDRKLQSS NSSLSGISSH AVQTLSIVTS
0801: SLEESFETSA SADLQKNIEI AYVDREKEPL HGENTKVDNL CVEVESDDNC RIASKSVDHS GTVPSVANFE ESSSYMNCDN LANSDNSVNM DPCDLISETH
0901: PIEEDVSNTS VDKVEIVASL NQSSLHAISE LEIENGHVGS LDLQSDVCSL HSESSIDELN EQSLHAASGD GNEILASADS MDHKDIVREE STVTLEGQGG
1001: NKPRSLTLEE ATDTILFCSS IVHDLAYRAA NIAIEKEDSV LLKDSRPTVT IVGKANSDRR DPRGRISGRR NSKSSQKARQ KMEVDTKSPQ SKANTESDEK
1101: MDKSTTRIVG APIKGDSLNP PKLESKCNCT IM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.