Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400045033 | Potato | nucleus | 45.27 | 47.22 |
| KRG97456 | Soybean | nucleus | 45.52 | 46.63 |
| KRH31435 | Soybean | nucleus | 44.26 | 45.45 |
| KRH42634 | Soybean | nucleus | 45.02 | 45.36 |
| Solyc05g014640.2.1 | Tomato | nucleus | 42.57 | 44.52 |
| GSMUA_Achr2P20960_001 | Banana | nucleus | 30.91 | 36.71 |
| CDY27635 | Canola | nucleus | 33.53 | 35.23 |
| AT1G27850.1 | Thale cress | nucleus | 34.04 | 35.1 |
| CDX84901 | Canola | mitochondrion, nucleus | 33.28 | 34.56 |
| CDX90111 | Canola | nucleus | 30.74 | 34.31 |
| Bra032851.1-P | Field mustard | nucleus | 32.6 | 34.25 |
| Bra010916.1-P | Field mustard | nucleus | 31.08 | 34.2 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 33.78 | 33.81 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 30.24 | 33.21 |
| CDY11763 | Canola | nucleus | 29.56 | 32.53 |
| Os12t0239200-01 | Rice | nucleus | 30.07 | 30.07 |
| Os12t0239000-01 | Rice | nucleus | 29.56 | 29.81 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 29.39 | 29.57 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 29.48 | 29.55 |
| KXG23347 | Sorghum | nucleus | 29.39 | 29.54 |
| TraesCSU01G135900.1 | Wheat | nucleus | 29.39 | 29.47 |
| Zm00001d041124_P002 | Maize | nucleus | 28.04 | 29.3 |
| Zm00001d041136_P002 | Maize | nucleus | 28.63 | 29.07 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 28.8 | 28.92 |
| Zm00001d023797_P004 | Maize | nucleus | 27.87 | 27.66 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.42 | 25.62 |
| VIT_13s0067g00570.t01 | Wine grape | nucleus | 10.14 | 22.02 |
| VIT_08s0007g02160.t01 | Wine grape | nucleus | 9.63 | 20.8 |
| VIT_08s0056g00640.t01 | Wine grape | nucleus | 8.87 | 18.42 |
Protein Annotations
| ArrayExpress:VIT_01s0010g02610 | EMBL:FN595754 | EnsemblPlants:VIT_01s0010g02610.t01 | EnsemblPlantsGene:VIT_01s0010g02610 | EntrezGene:100244315 | EntrezGene:LOC100244315 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 |
| ProteinID:CBI27564 | ProteinID:CBI27564.3 | RefSeq:XP_002266100 | RefSeq:XP_002266100.1 | SEG:seg | unigene:Vvi.17524 |
| UniParc:UPI00015CB762 | UniProt:D7TAP1 | wikigene:100244315 | wikigene:LOC100244315 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1:-:19670417..19679062
Molecular Weight (calculated)
128383.0 Da
IEP (calculated)
5.393
GRAVY (calculated)
-0.768
Length
1184 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPALRCS PGRELRGENH KRGHSFETGL ILREKDDDLA LFSDMQTREK DNFLVQSSDD FEDTFSTKLR YFSDLKLGIS VPARGESSDL LNADGEKNDY
0101: DWLLTPPDTP LFPSLDDETT STTVAHRGRP RSQPITISRS STMEKSYRSS RGSASPHRLS PSPRSGNGSF QSRGRPSSAP NSSPAPSLRH TTPTRRPSPP
0201: PSKSSTPAPR SSTPTPRRMS TGSSSTVASY GVRGTSPVKT SRGNSASPKI RAWQSNIPGF SSEAPPNLRT SLADRPASYV RGSSPASRNG RDSSSNVRRQ
0301: SMSPTASRSS SYSHDRDRFS SHSKGSVVSS GDDDIDSLQS VPMGSSDRSG SRRVGPFLNN RAPAFSKKPT KTLSSISAPK RSFDSAIRQM DHRRSPQNMF
0401: RPLLSSVPST TFYAGKTNSA HRTLISRNSS VTTSSNASSD QGTSVALDTE ESEQNQDDVA SEGEKAPYPD VQDEVFILDK VDVVNEGIGH KISVESHQSE
0501: HTNFDQGLAV ESDHGDAYNL SFHDTAMATS ATSEALHVKG VVLEFDNLEN ILVCSQCGGR YHAIEPVERE IKLCPDCRMK DDLLIVSTPV TKTIVSDNSP
0601: APSTKILEEY KPFDQMELQM AVSELPETTD MGETQIFPCE ENVRQGQTSH GVQSQSHVPE NSPARSLEEE GEQRLGNQQV MAQPDVGYYT PDGNTSNQQL
0701: RHLNDYPNLK VDISEGAGIS VLLLKRSSSS KGPVLQGRTF TATTISYDDP SYARDITNSM RSSIGHGSAS ASSSVDLGSA KHMETRVQRQ LSGRKSDMEN
0801: YKYDPNTKPQ ITSSPFSAVS SHASQASGLA MSTHEDNFEV SAGNRQYAVV VERPVASQGQ VLASENAEVN DWNSSFSGTS VLEEDNFDCN ESCRTADAST
0901: SELLSHALSN QVQDSSAASF PSCENCLSYE NSEDFPNNSR STPDIEESVG TTESCFGEEH TISNTGVDGG PQEVPTHSSL VTVSEIEIEN GHQSTPDSQI
1001: DAVYSKGAVD DFQEPSVSAS LDKDLTALVP EPNTSDHAHG MLEESTIVVE GHGRNRSRSL TLDEATDTIL FCSSIVHNLA YQAATIAMEK ENVVPLEGSR
1101: PTVTLLGKSN SDRKEAHGRS AGKRSSKSQK SRQRRVETDA KPPLTNTESD EKNDESLPRI VGLPDKVDST KPPKLESKCN CAIM
0101: DWLLTPPDTP LFPSLDDETT STTVAHRGRP RSQPITISRS STMEKSYRSS RGSASPHRLS PSPRSGNGSF QSRGRPSSAP NSSPAPSLRH TTPTRRPSPP
0201: PSKSSTPAPR SSTPTPRRMS TGSSSTVASY GVRGTSPVKT SRGNSASPKI RAWQSNIPGF SSEAPPNLRT SLADRPASYV RGSSPASRNG RDSSSNVRRQ
0301: SMSPTASRSS SYSHDRDRFS SHSKGSVVSS GDDDIDSLQS VPMGSSDRSG SRRVGPFLNN RAPAFSKKPT KTLSSISAPK RSFDSAIRQM DHRRSPQNMF
0401: RPLLSSVPST TFYAGKTNSA HRTLISRNSS VTTSSNASSD QGTSVALDTE ESEQNQDDVA SEGEKAPYPD VQDEVFILDK VDVVNEGIGH KISVESHQSE
0501: HTNFDQGLAV ESDHGDAYNL SFHDTAMATS ATSEALHVKG VVLEFDNLEN ILVCSQCGGR YHAIEPVERE IKLCPDCRMK DDLLIVSTPV TKTIVSDNSP
0601: APSTKILEEY KPFDQMELQM AVSELPETTD MGETQIFPCE ENVRQGQTSH GVQSQSHVPE NSPARSLEEE GEQRLGNQQV MAQPDVGYYT PDGNTSNQQL
0701: RHLNDYPNLK VDISEGAGIS VLLLKRSSSS KGPVLQGRTF TATTISYDDP SYARDITNSM RSSIGHGSAS ASSSVDLGSA KHMETRVQRQ LSGRKSDMEN
0801: YKYDPNTKPQ ITSSPFSAVS SHASQASGLA MSTHEDNFEV SAGNRQYAVV VERPVASQGQ VLASENAEVN DWNSSFSGTS VLEEDNFDCN ESCRTADAST
0901: SELLSHALSN QVQDSSAASF PSCENCLSYE NSEDFPNNSR STPDIEESVG TTESCFGEEH TISNTGVDGG PQEVPTHSSL VTVSEIEIEN GHQSTPDSQI
1001: DAVYSKGAVD DFQEPSVSAS LDKDLTALVP EPNTSDHAHG MLEESTIVVE GHGRNRSRSL TLDEATDTIL FCSSIVHNLA YQAATIAMEK ENVVPLEGSR
1101: PTVTLLGKSN SDRKEAHGRS AGKRSSKSQK SRQRRVETDA KPPLTNTESD EKNDESLPRI VGLPDKVDST KPPKLESKCN CAIM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.