Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P20960_001 | Banana | nucleus | 32.47 | 35.11 |
| GSMUA_Achr6P12380_001 | Banana | nucleus | 36.18 | 32.97 |
| GSMUA_Achr10P... | Banana | mitochondrion | 8.26 | 32.72 |
| PGSC0003DMT400045033 | Potato | nucleus | 32.1 | 30.48 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 33.21 | 30.24 |
| KRG97456 | Soybean | nucleus | 30.98 | 28.89 |
| Solyc05g014640.2.1 | Tomato | nucleus | 29.59 | 28.18 |
| KRH31435 | Soybean | nucleus | 29.96 | 28.01 |
| Os12t0239000-01 | Rice | nucleus | 30.33 | 27.85 |
| KXG23347 | Sorghum | nucleus | 30.06 | 27.5 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 29.68 | 27.19 |
| TraesCSU01G135900.1 | Wheat | nucleus | 29.78 | 27.18 |
| KRH42634 | Soybean | nucleus | 29.59 | 27.15 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 29.41 | 26.89 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 29.41 | 26.84 |
| Zm00001d041124_P002 | Maize | nucleus | 28.2 | 26.83 |
| Os12t0239200-01 | Rice | nucleus | 28.85 | 26.27 |
| Zm00001d023797_P004 | Maize | nucleus | 28.29 | 25.57 |
| Zm00001d041136_P002 | Maize | nucleus | 27.64 | 25.56 |
| AT1G27850.1 | Thale cress | nucleus | 26.99 | 25.35 |
| CDX90111 | Canola | nucleus | 24.4 | 24.79 |
| CDY27635 | Canola | nucleus | 25.6 | 24.49 |
| Bra010916.1-P | Field mustard | nucleus | 24.4 | 24.44 |
| Bra032851.1-P | Field mustard | nucleus | 25.42 | 24.31 |
| CDX84901 | Canola | mitochondrion, nucleus | 25.14 | 23.77 |
| CDY11763 | Canola | nucleus | 23.65 | 23.7 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.6 | 23.49 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 10.02 | 21.22 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 10.39 | 18.73 |
| GSMUA_Achr10P... | Banana | nucleus | 9.46 | 18.12 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 10.2 | 15.56 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 7.42 | 13.79 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 6.03 | 13.6 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 4.08 | 8.96 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P17040_001 | EnsemblPlants:GSMUA_Achr3T17040_001 | EnsemblPlantsGene:GSMUA_Achr3G17040_001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | SEG:seg |
| UniParc:UPI000295DFF6 | UniProt:M0SFC0 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G17040_001]
Coordinates
chr3:+:18286822..18292849
Molecular Weight (calculated)
117493.0 Da
IEP (calculated)
5.491
GRAVY (calculated)
-0.660
Length
1078 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPSLRRS PGIELRKGSS HTRGQSFESG LLLKAKDDDL VLFHEMQKHE TDNFLLHMSD DFDDSITKFG YTSDLKLGIT IPAEGEASGL LDIDGDKNDY
0101: DWLLTPPDTP LFPSLDDESQ PLNTSRGRIR SQPILISRPY TNEKTQRTSR SSASPKRLSL SPQSSYGVVQ PSARPSSPPH YTSPVIRQTT PSQRSSTPTK
0201: PSTLTPRSST PTLQRMSSGL SGQTSTSGRR GTSPVNMNRG HSASPKLRGW QSNSFPIIDA PPNYRTSLPD RLSSRVRGSS PASGNSMVSS SKVGRRSMSP
0301: SASTKARSSH NHESHQFTSC NKASLASSGD DGVDSVLSVG LSGNAAVRKY GASANSKAIT NYRKPSSFPS SGSGPRRSLD SAVRQIDHQK IPQNMFRPLM
0401: SSVPATTFYV GKTTHGTTFS RSLSQFTNHN ASTINDLNYA ADVEDSDHAQ SDLAGESEKI KDSKTQEVSM SNFDEISEDN CYHALSGKLR GGTKGFDQGM
0501: NKEDDVQELE SSAGETALQS SDIARCSGIG SYVACLICGK HFLIIDVDGY KDICQECAAT DKLLDSRGQR GDPDKATDVT GNDSLDSPDS KVHLQMGMAE
0601: RPDKNQSEFL LAIDVGLEHL PEQVMNSLIN IGDQPLREQL MNSLDGESPK EATGRYIPQL SNPTAYSSLT FDIAEGTGIS ALVMQRSSSI KWPAVQRRAY
0701: SATSIICSDP SYSRDNFSGM KCNTGRESSS ASSSIDLGSS AQTVASRKTD ICVLRQSSRR MDEVDTLKIN YSMNAESNDS QSEASVTSLD TANHVNTYED
0801: TNLSHAENAS IEKAFIGQDT SCAPILDPEF CFQLHDATIQ DNLNDDNSTL SRKTNEVVFQ NDRVGILDLE LEVPITTPDC SSIEDNHMLN DIGCQDDILD
0901: AASNSSSNLL LEQQIEHCFQ DAQNEQAHGE APTYMDGLQE PHAKVEAPRR SMQRTFTLEE ATDTVLFCSS IVHDLAYKAA AIGMEKEMAA SDASRPTVTR
1001: LAKSISYQMD FQNTSNKCVK NSRKVKRKRL EIDTKKPPMD LGNDGNYPEL VSSSAEDLQM INSMKPPKLE SKCNCTVM
0101: DWLLTPPDTP LFPSLDDESQ PLNTSRGRIR SQPILISRPY TNEKTQRTSR SSASPKRLSL SPQSSYGVVQ PSARPSSPPH YTSPVIRQTT PSQRSSTPTK
0201: PSTLTPRSST PTLQRMSSGL SGQTSTSGRR GTSPVNMNRG HSASPKLRGW QSNSFPIIDA PPNYRTSLPD RLSSRVRGSS PASGNSMVSS SKVGRRSMSP
0301: SASTKARSSH NHESHQFTSC NKASLASSGD DGVDSVLSVG LSGNAAVRKY GASANSKAIT NYRKPSSFPS SGSGPRRSLD SAVRQIDHQK IPQNMFRPLM
0401: SSVPATTFYV GKTTHGTTFS RSLSQFTNHN ASTINDLNYA ADVEDSDHAQ SDLAGESEKI KDSKTQEVSM SNFDEISEDN CYHALSGKLR GGTKGFDQGM
0501: NKEDDVQELE SSAGETALQS SDIARCSGIG SYVACLICGK HFLIIDVDGY KDICQECAAT DKLLDSRGQR GDPDKATDVT GNDSLDSPDS KVHLQMGMAE
0601: RPDKNQSEFL LAIDVGLEHL PEQVMNSLIN IGDQPLREQL MNSLDGESPK EATGRYIPQL SNPTAYSSLT FDIAEGTGIS ALVMQRSSSI KWPAVQRRAY
0701: SATSIICSDP SYSRDNFSGM KCNTGRESSS ASSSIDLGSS AQTVASRKTD ICVLRQSSRR MDEVDTLKIN YSMNAESNDS QSEASVTSLD TANHVNTYED
0801: TNLSHAENAS IEKAFIGQDT SCAPILDPEF CFQLHDATIQ DNLNDDNSTL SRKTNEVVFQ NDRVGILDLE LEVPITTPDC SSIEDNHMLN DIGCQDDILD
0901: AASNSSSNLL LEQQIEHCFQ DAQNEQAHGE APTYMDGLQE PHAKVEAPRR SMQRTFTLEE ATDTVLFCSS IVHDLAYKAA AIGMEKEMAA SDASRPTVTR
1001: LAKSISYQMD FQNTSNKCVK NSRKVKRKRL EIDTKKPPMD LGNDGNYPEL VSSSAEDLQM INSMKPPKLE SKCNCTVM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.