Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P20960_001 | Banana | nucleus | 38.72 | 45.94 |
| GSMUA_Achr10P... | Banana | mitochondrion | 8.96 | 38.97 |
| GSMUA_Achr3P17040_001 | Banana | nucleus | 32.97 | 36.18 |
| PGSC0003DMT400045033 | Potato | nucleus | 32.88 | 34.27 |
| VIT_01s0010g02610.t01 | Wine grape | nucleus | 33.81 | 33.78 |
| KRG97456 | Soybean | nucleus | 32.12 | 32.87 |
| Solyc05g014640.2.1 | Tomato | nucleus | 31.45 | 32.86 |
| KRH31435 | Soybean | nucleus | 31.87 | 32.7 |
| TraesCS5D01G124400.1 | Wheat | nucleus | 31.61 | 31.78 |
| KRH42634 | Soybean | nucleus | 31.53 | 31.74 |
| TraesCSU01G135900.1 | Wheat | nucleus | 31.53 | 31.58 |
| Os12t0239000-01 | Rice | nucleus | 30.6 | 30.83 |
| TraesCS5B01G121900.1 | Wheat | nucleus | 30.68 | 30.74 |
| KXG23347 | Sorghum | nucleus | 30.6 | 30.73 |
| Os12t0239200-01 | Rice | nucleus | 30.6 | 30.57 |
| HORVU5Hr1G030640.2 | Barley | nucleus | 30.26 | 30.36 |
| Zm00001d041124_P002 | Maize | nucleus | 27.9 | 29.13 |
| Zm00001d041136_P002 | Maize | nucleus | 28.57 | 28.99 |
| Zm00001d023797_P004 | Maize | nucleus | 29.16 | 28.92 |
| CDY27635 | Canola | nucleus | 26.54 | 27.86 |
| AT1G27850.1 | Thale cress | nucleus | 26.54 | 27.35 |
| HORVU5Hr1G030630.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 26.63 | 26.81 |
| Bra032851.1-P | Field mustard | nucleus | 25.11 | 26.35 |
| CDX84901 | Canola | mitochondrion, nucleus | 25.19 | 26.14 |
| Bra010916.1-P | Field mustard | nucleus | 23.58 | 25.93 |
| CDX90111 | Canola | nucleus | 22.99 | 25.64 |
| CDY11763 | Canola | nucleus | 22.82 | 25.09 |
| GSMUA_Achr6P33750_001 | Banana | cytosol, mitochondrion | 8.54 | 19.84 |
| GSMUA_Achr8P02330_001 | Banana | cytosol | 9.38 | 18.56 |
| GSMUA_Achr10P... | Banana | nucleus | 8.28 | 17.41 |
| GSMUA_Achr3P09700_001 | Banana | cytosol | 6.42 | 15.9 |
| GSMUA_Achr5P28870_001 | Banana | cytosol | 9.3 | 15.56 |
| GSMUA_Achr6P25180_001 | Banana | cytosol | 7.52 | 15.34 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus, plastid | 4.65 | 11.2 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P12380_001 | EnsemblPlants:GSMUA_Achr6T12380_001 | EnsemblPlantsGene:GSMUA_Achr6G12380_001 | PANTHER:PTHR31949 | PANTHER:PTHR31949:SF3 | SEG:seg |
| UniParc:UPI000296E32B | UniProt:M0T6D6 | MapMan:35.2 | : | : | : |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G12380_001]
Coordinates
chr6:+:8283228..8288466
Molecular Weight (calculated)
129523.0 Da
IEP (calculated)
5.693
GRAVY (calculated)
-0.745
Length
1183 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPPSPSLRRS PVRELRMESS HKRGHSFENR FPLKAKDDDL VLFNEMQNRE RDNFLLHPSD DFDDSISKLR YISDFKLNIP AHGESSDLLN ADGEKNDYDC
0101: MRQLFSHNVN CLSPIRLLTP PDTPLFPSLD DDEPRPVNVS RGRARSQPIS ISRTSMCEKT PRTNRSSASP RRSSPSPGSS YNVVHSRTRP SSAPRSSPPH
0201: VLRPTTPSRR PSTPPAKPSS PAQRSLTPTL RRMSTGSSGQ AFAGKRGTSP IKVNQGSSAS PKLRGWQSSL HDFSTDAPPN LRTSLTDRPA SHVRGSPPAS
0301: GNGRNCVSKF GRQSISPSSS RSARSSHNSE GDHFTSICKP SAASSCEDDV ESHASMGVSP NAATRKYRDF ANTRAMGFSK KNSRSPSSCS APKRSFDSAL
0401: RQMDHHKTPQ NMFRPLLSSV PATTFYVGKA NSTHRPMFSR NSSHTNSSYA SSELGASVAP YLEDGDHDQS EWEKKKDAGF QDEVFMFDKL DEIGEDTGND
0501: TCAANLQSSN EFFDGCVTNK DGSILKCSTG DGNAVNTTIA CPGSSCAAEC SEIVSAEKMS ICSKCGRKFM VIYKDMDVDV CQECSDAYEL IESEEPGTIQ
0601: VPMRDEGNYK MGHKVQSQMG MSAHSESKNE LRPRQHERSS EQAVTNFPAD SGLYLLVSDK REEIPSKGEV FVPGELSASR SSDKHEYQQN LPKQEVFVPG
0701: QLNAPESSDN CESLQAQPTP SISDKVDNSE GTGIAVLLAH RSSSRKWPVM QGKIFSAANI PFSEPSYKRD NMTAMKRSFG RDSSSASSSI DLGSSGQLDG
0801: RIGRQLSSRK GEMENVRGES HTSAWGCGSH SDTNSTVTET LVHPQNESKE VSYADLNALE HISMEQAVTD VYSNALDHTS IEQTVVDIDV SNYTGASLAS
0901: NDLLLQSKEE PGLQLHDTTV SNNLGESCDL CEDTTQVLFN NSESNIEDIE APVATTDSCS IEDNYMLNDT GHQNGFSGVA TDSPSAMISE QQNDKVTLQD
1001: EQDDCTPAQV PNSVENFQEG SISTTSDKDV LLSELESISK DLSNEQVMTV EAPRKQMQRS FTLEEATDTI LFCSSIIHDM AYKAATIAIE KELALYESSH
1101: QAVTFVGSSV SNWKDLRNIS NKYIQNSQKV RRKKPETAEK MPLTEVGNNV RNSEIPSCNA EAPQVVDSVK PPKLESKCNC TVM
0101: MRQLFSHNVN CLSPIRLLTP PDTPLFPSLD DDEPRPVNVS RGRARSQPIS ISRTSMCEKT PRTNRSSASP RRSSPSPGSS YNVVHSRTRP SSAPRSSPPH
0201: VLRPTTPSRR PSTPPAKPSS PAQRSLTPTL RRMSTGSSGQ AFAGKRGTSP IKVNQGSSAS PKLRGWQSSL HDFSTDAPPN LRTSLTDRPA SHVRGSPPAS
0301: GNGRNCVSKF GRQSISPSSS RSARSSHNSE GDHFTSICKP SAASSCEDDV ESHASMGVSP NAATRKYRDF ANTRAMGFSK KNSRSPSSCS APKRSFDSAL
0401: RQMDHHKTPQ NMFRPLLSSV PATTFYVGKA NSTHRPMFSR NSSHTNSSYA SSELGASVAP YLEDGDHDQS EWEKKKDAGF QDEVFMFDKL DEIGEDTGND
0501: TCAANLQSSN EFFDGCVTNK DGSILKCSTG DGNAVNTTIA CPGSSCAAEC SEIVSAEKMS ICSKCGRKFM VIYKDMDVDV CQECSDAYEL IESEEPGTIQ
0601: VPMRDEGNYK MGHKVQSQMG MSAHSESKNE LRPRQHERSS EQAVTNFPAD SGLYLLVSDK REEIPSKGEV FVPGELSASR SSDKHEYQQN LPKQEVFVPG
0701: QLNAPESSDN CESLQAQPTP SISDKVDNSE GTGIAVLLAH RSSSRKWPVM QGKIFSAANI PFSEPSYKRD NMTAMKRSFG RDSSSASSSI DLGSSGQLDG
0801: RIGRQLSSRK GEMENVRGES HTSAWGCGSH SDTNSTVTET LVHPQNESKE VSYADLNALE HISMEQAVTD VYSNALDHTS IEQTVVDIDV SNYTGASLAS
0901: NDLLLQSKEE PGLQLHDTTV SNNLGESCDL CEDTTQVLFN NSESNIEDIE APVATTDSCS IEDNYMLNDT GHQNGFSGVA TDSPSAMISE QQNDKVTLQD
1001: EQDDCTPAQV PNSVENFQEG SISTTSDKDV LLSELESISK DLSNEQVMTV EAPRKQMQRS FTLEEATDTI LFCSSIIHDM AYKAATIAIE KELALYESSH
1101: QAVTFVGSSV SNWKDLRNIS NKYIQNSQKV RRKKPETAEK MPLTEVGNNV RNSEIPSCNA EAPQVVDSVK PPKLESKCNC TVM
0001: MPPSPALRCS PGRELPGKKH RRGHSIEYGI LFRDKDDDLA LFSEMQDKER DSFLLQSSDD LEDVFSTKLK HFSEFTIPVQ GESSRLLTAE GDKNDYDWLL
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
0101: TPPDTPLFPS LDDQPPAASV VRRGRPQSQI SLSRSSTMEK SRRSSKGSAS PNRLSTSPRA DNMQQIRGRP SSARHPSPAS GRRSGTPVRR ISPTPGKPSG
0201: PVSRSPTPTS RRMSTGSTTM ASPAVRGTSP VSSSRGNSPS PKIKVWQSNI PGFSLDAPPN LRTSLGDRPA SYVRGSSPAS RNGRDAVSTR SRKSVSPSAS
0301: RSVSSSHSHE RDRFSSQSKG SVASSGDDDL HSLQSIPVGG SERAVSKRAS LSPNSRTSRS SKLLSPGSAP RRPFESALRQ MEHPKSHHSM FRPLASSLPS
0401: TGIYSGKGSS SYHHIMLRHS TATVGSNSSS GQVTGFMPDA KGMDPVPVFQ SEVENLAYPD KHEESIAFGM VNLSNESSRH ESHESSFSDQ LGDMDQDYTV
0501: ECESSANEEV SHQVFDVENS STHGSLHVGN EFLEGVALET MEVCGRCGSH YCATEATRSE INICPECREE HSFVETDSPG TNSPKLSQTI FDENKLYFEN
0601: IPVIDVLDSL PVVMVEEEIL ETPEKIEQCD NSYEQEQYHL YESSISRALE EQNVDMLNYK DGTQSSTGCG PLSIGTKDTQ TQLSDKHHDV NIGSLGRGDV
0701: PLVIKRSVSM KSPVIQANNS SCFTRSYEGF SYSRDRSISL RSSTETASAS SSWDYGSSIR KGSHIRQRSG STLDLETHRY DTNSKSLSTM SSSSGMSSHT
0801: FQALNVMPED SFEMCAAQMT CTLDETHQES HTEPQNLECK ETNVMNADFV ESVGLVRISA NVLGDLAEHN PVVMDDECCE NGNDVANTVI SKGETRESPA
0901: HIRSTSDLGA SPITDDCPFN DHSRLQENDV NETPHGLSTT TASEIEPESS EPEIPGLGVH DEIPESERNL NAVDDCSEKS MVHASVDHHS SSAPVNEILD
1001: ESTVLVECPG GKEPRSLTLE EATDTILFCS SIVHDLVYQA ATIAMDKAKD VPAEEEMLHP TVTVLGKSNA NRNSYGLGGG TKAKKRSSKA AKASRKQTET
1101: EEKTEVQIEN DENAGEAVMM RNVGVPPSKG ENMKPPPNLE SKCNCSIM
Arabidopsis Description
RUN/FYVE domain protein [Source:UniProtKB/TrEMBL;Acc:Q9C6N3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.