CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, plastid

Predictor Summary:

mitochondrion 3
plastid 3
golgi 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0098g00770.t01	Wine grape	cytosol	46.06	67.29
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	60.77	66.28
PGSC0003DMT400069509	Potato	endoplasmic reticulum	60.13	65.58
VIT_16s0098g00780.t01	Wine grape	mitochondrion	53.94	64.21
GSMUA_Achr5P10200_001	Banana	cytosol	42.64	62.7
OQU81996	Sorghum	endoplasmic reticulum, extracellular	53.73	60.29
TraesCS2D01G375700.1	Wheat	endoplasmic reticulum	52.88	59.62
TraesCS2B01G396400.1	Wheat	endoplasmic reticulum	52.88	58.91
TraesCS2A01G379500.1	Wheat	endoplasmic reticulum	52.24	58.89
HORVU2Hr1G089950.3	Barley	endoplasmic reticulum	53.3	58.14
Zm00001d003002_P001	Maize	extracellular	53.09	57.77
Os04t0521800-01	Rice	endoplasmic reticulum	51.6	56.81
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	52.88	56.62
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	52.88	56.49
CDY09109	Canola	cytoskeleton, cytosol, vacuole	8.53	56.34
CDX90411	Canola	cytoskeleton, cytosol, vacuole	8.53	56.34
Bra010868.1-P	Field mustard	cytoskeleton, cytosol, vacuole	8.53	56.34
TraesCS2A01G379400.1	Wheat	endoplasmic reticulum	52.24	56.06
AT5G54140.1	Thale cress	endoplasmic reticulum	50.96	55.84
CDY60579	Canola	endoplasmic reticulum	50.53	55.24
HORVU2Hr1G090000.1	Barley	endoplasmic reticulum, golgi, mitochondrion	52.88	55.23
CDY14333	Canola	endoplasmic reticulum	49.68	54.57
Bra003012.1-P	Field mustard	endoplasmic reticulum	49.47	54.21
Bra020158.1-P	Field mustard	cytosol, extracellular, nucleus	8.53	50.0
KRH44216	Soybean	extracellular	43.5	47.33
KRH23345	Soybean	endoplasmic reticulum	43.92	46.4
KRH09985	Soybean	endoplasmic reticulum	43.92	46.4
KRH47175	Soybean	endoplasmic reticulum	43.5	46.15
KRH44217	Soybean	endoplasmic reticulum, golgi	43.28	45.82
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	42.86	45.58
KRG99236	Soybean	endoplasmic reticulum	42.0	44.67
KRH53263	Soybean	endoplasmic reticulum	44.14	44.52
KRH45754	Soybean	endoplasmic reticulum	42.0	44.47
KRH44214	Soybean	endoplasmic reticulum	43.5	43.78
KRH64641	Soybean	endoplasmic reticulum	43.28	43.56
KRH44221	Soybean	endoplasmic reticulum, extracellular	18.12	42.93
KRH44220	Soybean	cytosol	23.88	41.48
KRH44218	Soybean	golgi	43.28	38.09
KRH47173	Soybean	cytosol, plastid	14.5	36.96

Protein Annotations

EntrezGene:100777587	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	EMBL:ACUP02002751	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlantsGene:GLYMA_04G226600	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	UniProt:I1JYG0	EnsemblPlants:KRH64274	ProteinID:KRH64274	ProteinID:KRH64274.1	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF140	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	TIGRFAMs:TIGR01891	TMHMM:TMhelix	UniParc:UPI00029550BF	SEG:seg

Description

hypothetical protein

Coordinates

chr4:-:49616823..49622106

Molecular Weight (calculated)

51610.9 Da

IEP (calculated)

6.546

GRAVY (calculated)

-0.048

Length

469 amino acids

Sequence
(BLAST)

001: MRVGQRVTWK QVSNKNSGSY NLQFSNSHAE RVVQCGEMSA YLITAIHLLL VFLSSSTSLS TVFGSEEEQF YAKEILGAAQ KEKEWLVSVR RKIHEHPELA
101: FQEYETSSLI RSELDKLGIS YTYPVAKTGI VAHLGSGSRP IIAIRADIDA LPMQELVEWE HKSKIEGRMH ACGHDAHTTM LLGAAKLLNQ RQDNLQGTVR
201: LLFQPGEEGA RGALQMINEG VLQDVEAIFA LHIDTTTPTG AIASIPGALT AAGCMFEAKI VGVGGHAASP HKNVDPVLAT SFAILALQQL VSRESDPLHN
301: QVLSVTFVEG GTALNVIPSY VKFGGTLRSL TNEGMYHFRQ RLKEIIEGQA AVHRCNAYVD FKEEYFTPYP AVVNDNNLHL HVERVGQILL GPDNVHAAKK
401: VMAGEDFAFF QQVIPGVLFS IGIRNDKVGA IHSPHSPFFF LDEEVLPIGA SLHTAIAELY LNEHKHTIY

Best Arabidopsis Sequence Match ( AT5G54140.1 )
(BLAST)

001: MANSSIVALL LLFVIASSVN GGDQEYPNQY LTEALGDKEW LVSVRRQIHE NPELLFELHK TSALIRRELD ELGVSYSYPV AKTGIVAQIG SGYPPVVALR
101: ADMDALPLQE LVEWDHKSKI DGKMHACGHD SHTTMLLGAA KLLSKRKRML NGTVRLLFQP AEEGGAGAFH MIKEGALGDS EAIFGMHVHT GLPTGELATI
201: SGPALASTSI FSVRMSGKSP ASSETYSCVD PVLAASSTIL ALQLIISREV DPLLSHVLSV TFMKSGGSEF DVIPAYVEFG GTLRSLTTNG INWLIKRLKE
301: VVEGQAEVQR CKADIDMHED DHPMYPATVN DHKLHEFTEK VLKLLLGPEK VKPANKVMAG EDFAFYQQKI PGYYIGIGIR NEEIGSVRSV HSPYFFLDEN
401: VLPIGSATFA ALAEMYLQEH QNQTKSGD

Arabidopsis Description

ILL3IAA-amino acid hydrolase ILR1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:O81641]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.