Factsheet for PGSC0003DMT400069509

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	97.44	97.44
VIT_16s0098g00770.t01	Wine grape	cytosol	56.05	75.08
VIT_16s0098g00780.t01	Wine grape	mitochondrion	64.19	70.05
GSMUA_Achr5P10200_001	Banana	cytosol	50.23	67.71
AT5G54140.1	Thale cress	endoplasmic reticulum	64.19	64.49
OQU81996	Sorghum	endoplasmic reticulum, extracellular	60.7	62.44
TraesCS2D01G375700.1	Wheat	endoplasmic reticulum	60.23	62.26
Bra010868.1-P	Field mustard	cytoskeleton, cytosol, vacuole	10.23	61.97
CDX90411	Canola	cytoskeleton, cytosol, vacuole	10.23	61.97
CDY09109	Canola	cytoskeleton, cytosol, vacuole	10.23	61.97
Os04t0521800-01	Rice	endoplasmic reticulum	60.93	61.5
TraesCS2A01G379500.1	Wheat	endoplasmic reticulum	59.3	61.3
CDY14333	Canola	endoplasmic reticulum	60.7	61.12
TraesCS2B01G396400.1	Wheat	endoplasmic reticulum	59.53	60.81
Bra003012.1-P	Field mustard	endoplasmic reticulum	60.47	60.75
Zm00001d003002_P001	Maize	extracellular	60.7	60.56
CDY60579	Canola	endoplasmic reticulum	60.23	60.37
KRH64274	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	65.58	60.13
HORVU2Hr1G089950.3	Barley	endoplasmic reticulum	60.0	60.0
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	60.23	59.13
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	60.0	58.77
TraesCS2A01G379400.1	Wheat	endoplasmic reticulum	59.3	58.35
HORVU2Hr1G090000.1	Barley	endoplasmic reticulum, golgi, mitochondrion	59.77	57.24
Bra020158.1-P	Field mustard	cytosol, extracellular, nucleus	10.23	55.0
PGSC0003DMT400081932	Potato	endoplasmic reticulum	35.81	54.04
PGSC0003DMT400076719	Potato	cytosol	43.72	53.71
PGSC0003DMT400081926	Potato	endoplasmic reticulum	28.84	51.03
PGSC0003DMT400079045	Potato	endoplasmic reticulum	51.16	50.23
PGSC0003DMT400006691	Potato	endoplasmic reticulum	50.47	48.76
PGSC0003DMT400040310	Potato	endoplasmic reticulum	49.3	47.75
PGSC0003DMT400000925	Potato	endoplasmic reticulum	47.91	46.19
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	23.95	41.87

Protein Annotations

EntrezGene:102604725	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:M1CKK4
PFAM:PF01546	PFAM:PF07687	EnsemblPlantsGene:PGSC0003DMG401027023	PGSC:PGSC0003DMG401027023	EnsemblPlants:PGSC0003DMT400069509	PIRSF:PIRSF005962
PANTHER:PTHR11014	PANTHER:PTHR11014:SF140	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031
SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	TMHMM:TMhelix	UniParc:UPI0002953416	RefSeq:XP_006347315.1	SEG:seg

Description

Iaa-amino acid hydrolase 5 [Source:PGSC_GENE;Acc:PGSC0003DMG401027023]

Coordinates

chr6:+:53636773..53641403

Molecular Weight (calculated)

47275.8 Da

IEP (calculated)

6.024

GRAVY (calculated)

-0.071

Length

430 amino acids

Sequence
(BLAST)

001: MFTFSPILVL LLLFCFSLLY SVQGSYFDQE FVKQILSSAS KDKDWLVSIR RKIHEYPELR FEEYNTSALI RSELDKLGVY YEYPFAKTGI VAQIGNGSPP
101: VVALRADMDA LPLQELVEWE HKSKINGKMH GCGHDAHTTM LLGAAKLLNE RKDKLNGTVR LVFQPAEEGG AGANHMIKEG ALGDAEVIFG MHVDFKRPTG
201: GIGTSPGPLL AAVCFFEARV EGKGGHAAQP HEAVDPILAA SFAIVALQQL ISREVDPLHS QVLSVTYVRG GSASNVIPSY VEFGGTLRSL TTEGLSQLQK
301: RVKEVIEGQA AVHRCKAYVD MKQEDFPAYP ACTNDENLHQ HVERVGKLVL GSENVGEIEK VMAGEDFAFY QQVIPGVIFQ IGIRNEKLGS THAPHSPHFF
401: LDEDVLPIGA AMHTAIAEMY LNDYQHPTAV

Best Arabidopsis Sequence Match ( AT5G54140.1 )
(BLAST)

001: MANSSIVALL LLFVIASSVN GGDQEYPNQY LTEALGDKEW LVSVRRQIHE NPELLFELHK TSALIRRELD ELGVSYSYPV AKTGIVAQIG SGYPPVVALR
101: ADMDALPLQE LVEWDHKSKI DGKMHACGHD SHTTMLLGAA KLLSKRKRML NGTVRLLFQP AEEGGAGAFH MIKEGALGDS EAIFGMHVHT GLPTGELATI
201: SGPALASTSI FSVRMSGKSP ASSETYSCVD PVLAASSTIL ALQLIISREV DPLLSHVLSV TFMKSGGSEF DVIPAYVEFG GTLRSLTTNG INWLIKRLKE
301: VVEGQAEVQR CKADIDMHED DHPMYPATVN DHKLHEFTEK VLKLLLGPEK VKPANKVMAG EDFAFYQQKI PGYYIGIGIR NEEIGSVRSV HSPYFFLDEN
401: VLPIGSATFA ALAEMYLQEH QNQTKSGD

Arabidopsis Description

ILL3IAA-amino acid hydrolase ILR1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:O81641]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.