Factsheet for PGSC0003DMT400076719

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036946.1-P	Field mustard	plasma membrane	59.14	70.65
CDY12538	Canola	cytosol, endoplasmic reticulum	59.14	70.65
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	96.57	69.69
KRH53263	Soybean	endoplasmic reticulum	81.14	61.08
KRH64641	Soybean	endoplasmic reticulum	80.29	60.3
VIT_18s0001g02570.t01	Wine grape	endoplasmic reticulum	82.29	59.14
GSMUA_Achr3P07240_001	Banana	endoplasmic reticulum	76.57	57.14
GSMUA_Achr8P23150_001	Banana	endoplasmic reticulum	72.57	55.82
CDY14979	Canola	endoplasmic reticulum	70.86	53.8
AT1G44350.1	Thale cress	endoplasmic reticulum	70.0	52.8
PGSC0003DMT400006691	Potato	endoplasmic reticulum	57.71	45.39
PGSC0003DMT400040310	Potato	endoplasmic reticulum	56.86	44.82
PGSC0003DMT400069509	Potato	endoplasmic reticulum	53.71	43.72
PGSC0003DMT400000925	Potato	endoplasmic reticulum	54.57	42.83
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	29.43	41.87
PGSC0003DMT400079045	Potato	endoplasmic reticulum	50.29	40.18
PGSC0003DMT400081932	Potato	endoplasmic reticulum	32.0	39.3
PGSC0003DMT400081926	Potato	endoplasmic reticulum	24.57	35.39

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607
GO:GO:0009694	GO:GO:0009719	GO:GO:0009753	GO:GO:0009987	GO:GO:0010112	GO:GO:0016787
GO:GO:1990206	UniProt:M1CXA3	PFAM:PF01546	PFAM:PF07687	EnsemblPlantsGene:PGSC0003DMG400029837	PGSC:PGSC0003DMG400029837
EnsemblPlants:PGSC0003DMT400076719	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF62	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	TIGRFAMs:TIGR01891	UniParc:UPI000295D725	:	:

Description

IAA-amino acid hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400029837]

Coordinates

chr10:+:58171156..58180534

Molecular Weight (calculated)

37884.3 Da

IEP (calculated)

6.391

GRAVY (calculated)

0.029

Length

350 amino acids

Sequence
(BLAST)

001: MEISYRFPLA TTGIRAIIGS GQPPFVALRA DMDALPIQEA VEWEHKSKIA GKMHACGHDA HVAMLIGAAR ILKAREKNLK GTVILIFQPA EEAGNGAKRM
101: IKDGALENVE AIFAAHVSHQ HPTGVIGSRT GPLLAGCGFF KAVISGKTGQ ASNPHHSIDP VLAASAAVIS LQSIVSRESN PLDSQVVSVT SFNAGDNLDV
201: IPETVTLSGT FRAFSTTNFY QLLKRIREVF TEQASVFRCS ATVDFFEDKD TIYPPTVNDN TMYEHVKKVA SDLVGTTNFK VVPPMMGAED FSFYSEVIPA
301: AFFYIGIRNE TLGSIHTGHS PHFMIDEDVL PIGAATHAAI AERYLYEYGS

Best Arabidopsis Sequence Match ( AT1G44350.1 )
(BLAST)

001: MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP
101: ELAFEEYETS RLIRSELDRM GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH VTMLLGAAHI LKAREHLLKG
201: TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV
301: VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM
401: GAEDFAFYSE IIPAAFYFIG IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS

Arabidopsis Description

ILL6IAA-amino acid hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WNN8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.