Factsheet for PGSC0003DMT400079045

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 7
vacuole 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	96.58	97.47
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	46.35	82.52
PGSC0003DMT400081932	Potato	endoplasmic reticulum	47.72	73.33
PGSC0003DMT400081926	Potato	endoplasmic reticulum	39.04	70.37
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	62.56	63.87
Zm00001d012887_P001	Maize	cytosol	55.94	60.05
EER93137	Sorghum	cytosol	55.02	59.8
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	51.6	59.79
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	58.45	59.4
HORVU5Hr1G027710.1	Barley	cytosol	43.61	59.13
TraesCS5D01G113000.2	Wheat	cytosol	43.38	58.82
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	57.08	58.82
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	51.6	58.7
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	56.62	58.63
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	56.39	58.53
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	56.39	58.53
TraesCS5B01G517000.1	Wheat	cytosol	54.79	58.39
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	56.85	58.31
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	56.85	58.31
TraesCS5D01G517000.1	Wheat	cytosol	53.65	58.02
TraesCS4A01G355300.1	Wheat	cytosol	38.36	57.93
EER93138	Sorghum	cytosol	55.02	57.79
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	56.39	57.71
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	56.85	57.37
Os07t0249800-01	Rice	cytosol	36.99	57.24
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	55.25	56.15
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	55.02	55.92
Os03t0836800-01	Rice	cytosol, plastid	35.16	55.8
Zm00001d015731_P001	Maize	endoplasmic reticulum	54.79	55.3
EER96151	Sorghum	endoplasmic reticulum	55.94	54.93
Zm00001d019306_P001	Maize	plastid	55.02	54.4
EER96147	Sorghum	mitochondrion	55.02	54.4
EER96149	Sorghum	endoplasmic reticulum	55.48	54.12
TraesCS4A01G355400.1	Wheat	cytosol	51.37	53.83
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	54.11	53.62
Os07t0249900-01	Rice	cytosol, plasma membrane	19.41	53.46
Os07t0249700-01	Rice	plasma membrane	54.79	52.86
PGSC0003DMT400069509	Potato	endoplasmic reticulum	50.23	51.16
EES15570	Sorghum	endoplasmic reticulum	52.28	51.12
PGSC0003DMT400076719	Potato	cytosol	40.18	50.29
TraesCS5B01G517200.1	Wheat	plastid	51.37	50.11
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	52.51	49.89
PGSC0003DMT400000925	Potato	endoplasmic reticulum	48.4	47.53
PGSC0003DMT400006691	Potato	endoplasmic reticulum	48.17	47.42
PGSC0003DMT400040310	Potato	endoplasmic reticulum	45.21	44.59
GSMUA_Achr8P32890_001	Banana	cytosol	57.99	43.79

Protein Annotations

EntrezGene:102605112	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:M1D159
PFAM:PF01546	PFAM:PF07687	EnsemblPlantsGene:PGSC0003DMG400030767	PGSC:PGSC0003DMG400030767	EnsemblPlants:PGSC0003DMT400079045	PIRSF:PIRSF005962
PANTHER:PTHR11014	PANTHER:PTHR11014:SF108	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031
SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI000296F9BE	RefSeq:XP_006356685.1	:	:

Description

Iaa-amino acid hydrolase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400030767]

Coordinates

chr6:-:40739355..40742752

Molecular Weight (calculated)

48596.4 Da

IEP (calculated)

6.452

GRAVY (calculated)

-0.115

Length

438 amino acids

Sequence
(BLAST)

001: MGSFCINLTL ILALLSTSFP YNSWAVDVDT NLGSETELLT RELMESARQP EFLDWLRRTR RKIHEYPELS FQEYQTSQFI RNELDSLGIK YLWPVAKTGV
101: VGTIGSGAQP WFGLRADMDA LPIQELVDWE FKSKIDGKMH ACGHDAHVTM LLGAARLIQN RRDKLKGTIK LVFQPAEEGY AGASYMLEEG ALDGFQAMFG
201: LHVWPFMPVG TIGSKPGPIM AGSSRFTVIM RGKGGHAATP HNTRDPILAV SMAVLALQQL VSRETDPLEP RVLTVAFVDG GQAGNVIPES VRFGGTFRFM
301: TLEGYSYLKQ RIKEIIETQA GVHQCSATVS FMEEMRPYPP TINDPKIYDH SKRVGEILLG NNNVQHSPAL MAAEDFGFYS QRMATAFFFI GTQNKTTSSS
401: VKGLHSPYFT IDEEVLPIGA ALHAAVAISY LDTHFKSE

Best Arabidopsis Sequence Match ( AT3G02875.1 )
(BLAST)

001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL

Arabidopsis Description

ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.