Factsheet for TraesCS2B01G091000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, plastid, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	82.08	83.6
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	91.95	82.9
Os07t0249800-01	Rice	cytosol	56.62	77.03
EER96147	Sorghum	mitochondrion	78.44	68.17
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	71.95	65.64
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	70.13	62.65
TraesCS5B01G517000.1	Wheat	cytosol	66.75	62.53
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	64.68	57.77
TraesCS5B01G517200.1	Wheat	plastid	64.94	55.68
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	60.78	54.55
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	58.96	51.83
PGSC0003DMT400079045	Potato	endoplasmic reticulum	58.7	51.6
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	57.92	51.38
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	57.66	50.45
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	32.21	50.41
CDY28718	Canola	endoplasmic reticulum	55.06	48.62
AT3G02875.1	Thale cress	endoplasmic reticulum	55.58	48.42
PGSC0003DMT400081932	Potato	endoplasmic reticulum	35.58	48.07
Bra040608.1-P	Field mustard	endoplasmic reticulum	54.55	48.05
CDY51525	Canola	endoplasmic reticulum	54.55	47.73
TraesCS2B01G396400.1	Wheat	endoplasmic reticulum	50.65	46.32
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	50.91	44.75
PGSC0003DMT400081926	Potato	endoplasmic reticulum	28.05	44.44
TraesCS3B01G283900.1	Wheat	endoplasmic reticulum	49.61	44.11
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	48.31	42.76
GSMUA_Achr8P32890_001	Banana	cytosol	61.82	41.03
TraesCS7B01G335500.1	Wheat	endoplasmic reticulum	48.05	38.22

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF91	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	TIGRFAMs:TIGR01891	EnsemblPlantsGene:TraesCS2B01G091000	EnsemblPlants:TraesCS2B01G091000.1	TIGR:cd08017	SEG:seg

Description

No Description!

Coordinates

chr2B:+:52348239..52351731

Molecular Weight (calculated)

40774.1 Da

IEP (calculated)

6.109

GRAVY (calculated)

0.116

Length

385 amino acids

Sequence
(BLAST)

001: MAARPASAHP PAPGAGLPRA PHKQLVRAEL DALGVPYVWP VAQTGVVATI IGGGGGGSGP VVALRADMDA LPLQELVDWE YKSLESGKMH ACGHDAHVTM
101: LLGAAKLLQS RKEDLKGTVK LVFQPAEEGY AGAYYILKEG VLDDVSAIFG LHVFAHLPVG VVASRPGPFL AAAARFTSTI MGKGGHAGNP HDAVDPVIAA
201: SSAILSLQQL VARETDPLES AVVSVTQLRG GDAYNVIPES ASFGGTFRSM TDEGLSYLMK RVKEIIEAQA AVHRCTAIVD FMEEKLKHYP ATVNDEGMYD
301: HSKKVAEAML GEANVKVAPR SMGGEDFAFY AQRAAGAFFF IGVGNETTMD MVRPVHSPHF VLDEDVLPII AAFHAAVAIE FLNRA

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.