Factsheet for PGSC0003DMT400081932

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081926	Potato	endoplasmic reticulum	82.11	96.3
TraesCS4A01G355300.1	Wheat	cytosol	50.18	49.31
PGSC0003DMT400079045	Potato	endoplasmic reticulum	73.33	47.72
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	63.16	41.96
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	59.3	39.21
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	56.14	37.47
EER93137	Sorghum	cytosol	52.98	37.47
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	56.14	37.38
Zm00001d012887_P001	Maize	cytosol	53.33	37.25
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	56.49	37.1
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	55.44	37.0
TraesCS5B01G517000.1	Wheat	cytosol	52.63	36.5
TraesCS5D01G517000.1	Wheat	cytosol	51.58	36.3
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	54.04	36.24
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	53.33	36.02
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	53.33	36.02
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	53.33	35.93
PGSC0003DMT400069509	Potato	endoplasmic reticulum	54.04	35.81
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	48.07	35.58
EER93138	Sorghum	cytosol	51.93	35.49
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	53.33	35.27
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	53.33	35.27
EER96147	Sorghum	mitochondrion	54.39	34.99
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	45.96	34.66
Zm00001d015731_P001	Maize	endoplasmic reticulum	52.63	34.56
PGSC0003DMT400000925	Potato	endoplasmic reticulum	53.33	34.08
Zm00001d019306_P001	Maize	plastid	52.63	33.86
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	51.93	33.48
EER96149	Sorghum	endoplasmic reticulum	52.63	33.41
TraesCS4A01G355400.1	Wheat	cytosol	48.77	33.25
EER96151	Sorghum	endoplasmic reticulum	51.93	33.18
Os07t0249700-01	Rice	plasma membrane	52.28	32.82
PGSC0003DMT400006691	Potato	endoplasmic reticulum	50.88	32.58
TraesCS5D01G113000.2	Wheat	cytosol	36.84	32.51
HORVU5Hr1G027710.1	Barley	cytosol	36.84	32.51
PGSC0003DMT400076719	Potato	cytosol	39.3	32.0
TraesCS5B01G517200.1	Wheat	plastid	49.12	31.18
PGSC0003DMT400040310	Potato	endoplasmic reticulum	48.42	31.08
EES15570	Sorghum	endoplasmic reticulum	48.42	30.8
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	49.82	30.8
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	24.91	28.86
GSMUA_Achr8P32890_001	Banana	cytosol	58.6	28.79
Os07t0249800-01	Rice	cytosol	25.96	26.15
Os03t0836800-01	Rice	cytosol, plastid	24.91	25.72
Os07t0249900-01	Rice	cytosol, plasma membrane	1.05	1.89

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:M1D5B8	PFAM:PF01546	EnsemblPlantsGene:PGSC0003DMG402032161
PGSC:PGSC0003DMG402032161	EnsemblPlants:PGSC0003DMT400081932	PANTHER:PTHR11014	PANTHER:PTHR11014:SF108	InterPro:Peptidase_M20	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-TM	TIGRFAMs:TIGR01891	TMHMM:TMhelix	UniParc:UPI0002963DB3	SEG:seg

Description

Iaa-amino acid hydrolase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG402032161]

Coordinates

chr1:-:1042928..1048731

Molecular Weight (calculated)

31693.8 Da

IEP (calculated)

8.101

GRAVY (calculated)

-0.004

Length

285 amino acids

Sequence
(BLAST)

001: MGSLSTNLFF FLCIFLLVLT IFPYNSLAVE ETLLRSETEL LTHELLESAK QPKFFDWLKR VRRRIHEYPE LAFEEYKTSQ FVRDELDLLG IEYVSPVAKT
101: GLVGTVGSGR QPWFGLRADM DALPMQELVD SEYKSKINGK MHACGHDAHV TMLLGAARLL QNRRDKLKGT VKLVFQPAEE GYAGASYMIE EGALDGVKAI
201: FGMHVWPFIP TGIIGSRPGP IMAGAGRFTA IMQGKGGHAA TPHRTKDPIL AVSMAVLALQ QIVSRETDPL ESRVCLALIP NKFKQ

Best Arabidopsis Sequence Match ( AT3G02875.3 )
(BLAST)

001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVSL LSTFKALVFD ESESWLKSAE IGFFMFLRWL
301: QLDILKEVML KT

Arabidopsis Description

ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.