Factsheet for Os03t0836800-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0249800-01	Rice	cytosol	67.39	65.72
Os07t0249900-01	Rice	cytosol, plasma membrane	36.59	63.52
EER93138	Sorghum	cytosol	76.45	50.6
EER93137	Sorghum	cytosol	73.55	50.37
Zm00001d012887_P001	Maize	cytosol	74.28	50.25
TraesCS5B01G517000.1	Wheat	cytosol	73.19	49.15
TraesCS5D01G517000.1	Wheat	cytosol	70.29	47.9
TraesCS4A01G355400.1	Wheat	cytosol	72.46	47.85
TraesCS5B01G517200.1	Wheat	plastid	71.38	43.88
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	72.83	43.6
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	38.04	42.68
Os07t0249700-01	Rice	plasma membrane	65.58	39.87
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	61.59	39.63
TraesCS4A01G355300.1	Wheat	cytosol	40.94	38.97
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	59.06	37.82
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	56.88	35.84
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	56.16	35.71
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	56.88	35.68
PGSC0003DMT400079045	Potato	endoplasmic reticulum	55.8	35.16
AT3G02875.1	Thale cress	endoplasmic reticulum	49.64	31.0
CDY28718	Canola	endoplasmic reticulum	48.91	30.96
Bra040608.1-P	Field mustard	endoplasmic reticulum	48.19	30.43
CDY51525	Canola	endoplasmic reticulum	48.19	30.23
Os04t0521800-01	Rice	endoplasmic reticulum	45.65	29.58
Os01t0560000-01	Rice	plasma membrane	47.1	29.41
Os01t0706900-01	Rice	mitochondrion	48.55	29.39
GSMUA_Achr8P32890_001	Banana	cytosol	58.7	27.93
PGSC0003DMT400081932	Potato	endoplasmic reticulum	25.72	24.91
Os06t0691400-01	Rice	endoplasmic reticulum	43.84	23.73
PGSC0003DMT400081926	Potato	endoplasmic reticulum	14.49	16.46

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	UniProt:A0A0P0W5B6	InterPro:Amidohydrolase	ProteinID:BAS87260.1
InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
EnsemblPlantsGene:Os03g0836800	EnsemblPlants:Os03t0836800-01	PFAM:PF01546	PFAM:PF07687	PANTHER:PTHR11014	PANTHER:PTHR11014:SF99
InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031	TIGRFAMs:TIGR01891	UniParc:UPI0000E122BE
SEG:seg	:	:	:	:	:

Description

Similar to IAA-amino acid hydrolase 1 (EC 3.5.1.-). (Os03t0836800-01)

Coordinates

chr3:+:35161307..35163174

Molecular Weight (calculated)

28649.0 Da

IEP (calculated)

4.646

GRAVY (calculated)

0.061

Length

276 amino acids

Sequence
(BLAST)

001: KLVFQPAEEG YAGGYYVLEE GAVDDVQGIF GMHVDAGLPA GVVASRPGPF LAGSARFTAT INGKGGHAAA PHHAVDPIVA VSSAVLSLQQ IVARETDPLQ
101: GAVVSVTTIK GGEAFNVIPE SVTLGGTLRS MTTDGMSYLM KRIREVIEGQ AAVNRCTAAV DFMEDKLPPY PATVNDEEMY AHAKAVAESM LGEANVKLSP
201: QGMGAEDFGF YAQRIPAAFF GIGVGNDGGG MAETTTKNQL HSPHFVVDEE ALPVGAAFHA AVAIEYLNKN ASGPSA

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.