Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0249800-01 | Rice | cytosol | 66.67 | 37.46 |
| Os03t0836800-01 | Rice | cytosol, plastid | 63.52 | 36.59 |
| HORVU5Hr1G055060.6 | Barley | endoplasmic reticulum | 76.1 | 28.61 |
| TraesCS5B01G178100.1 | Wheat | endoplasmic reticulum | 75.47 | 28.44 |
| TraesCS5D01G184700.1 | Wheat | endoplasmic reticulum | 75.47 | 28.24 |
| TraesCS5A01G180200.1 | Wheat | endoplasmic reticulum | 74.84 | 28.2 |
| PGSC0003DMT400010807 | Potato | endoplasmic reticulum, extracellular | 41.51 | 26.83 |
| Zm00001d019306_P001 | Maize | plastid | 72.33 | 25.96 |
| EES15570 | Sorghum | endoplasmic reticulum | 72.33 | 25.67 |
| Zm00001d015731_P001 | Maize | endoplasmic reticulum | 69.81 | 25.58 |
| EER96149 | Sorghum | endoplasmic reticulum | 67.3 | 23.83 |
| Os07t0249700-01 | Rice | plasma membrane | 64.15 | 22.47 |
| GSMUA_Achr6P19420_001 | Banana | endoplasmic reticulum | 57.23 | 21.11 |
| VIT_08s0007g02740.t01 | Wine grape | endoplasmic reticulum | 55.97 | 20.75 |
| Solyc06g054410.2.1 | Tomato | endoplasmic reticulum | 53.46 | 19.59 |
| PGSC0003DMT400079045 | Potato | endoplasmic reticulum | 53.46 | 19.41 |
| VIT_08s0007g02760.t01 | Wine grape | endoplasmic reticulum | 52.2 | 18.95 |
| VIT_08s0007g02770.t01 | Wine grape | endoplasmic reticulum | 52.2 | 18.86 |
| CDY28718 | Canola | endoplasmic reticulum | 45.91 | 16.74 |
| Bra040608.1-P | Field mustard | endoplasmic reticulum | 45.28 | 16.48 |
| CDY51525 | Canola | endoplasmic reticulum | 45.28 | 16.36 |
| AT3G02875.1 | Thale cress | endoplasmic reticulum | 45.28 | 16.29 |
| Os04t0521800-01 | Rice | endoplasmic reticulum | 43.4 | 16.2 |
| GSMUA_Achr8P32890_001 | Banana | cytosol | 56.6 | 15.52 |
| Os01t0706900-01 | Rice | mitochondrion | 40.25 | 14.04 |
| Os01t0560000-01 | Rice | plasma membrane | 38.99 | 14.03 |
| Os06t0691400-01 | Rice | endoplasmic reticulum | 42.14 | 13.14 |
| PGSC0003DMT400081932 | Potato | endoplasmic reticulum | 1.89 | 1.05 |
| PGSC0003DMT400081926 | Potato | endoplasmic reticulum | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.630.10 | MapMan:35.1 | UniProt:A0A0N7KN75 | ProteinID:BAT00834.1 | InterPro:Bact_exopeptidase_dim_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | EnsemblPlantsGene:Os07g0249900 | EnsemblPlants:Os07t0249900-01 |
| PFAM:PF01546 | PANTHER:PTHR11014 | PANTHER:PTHR11014:SF113 | InterPro:Peptidase_M20 | SUPFAM:SSF53187 | SUPFAM:SSF55031 |
| UniParc:UPI0000E12A61 | SEG:seg | : | : | : | : |
Description
Peptidase M20 family protein. (Os07t0249900-01)
Coordinates
chr7:-:8334409..8335722
Molecular Weight (calculated)
16784.0 Da
IEP (calculated)
6.229
GRAVY (calculated)
0.058
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: AYNVIPQSVE FGGTMRSMTD EGLAYLMKRI KEIVEGQAAV NRCGGGVDFM EESMRPYPAV VNDEGMYAHA RASAERLLGA GGVRVAPQLM GAEDFGFYAA
101: RMPSAFFTIG VGNATTSSAR AAHTTHSPHF VIDEAALPVG AAVHAAVAID YLSKHASSM
101: RMPSAFFTIG VGNATTSSAR AAHTTHSPHF VIDEAALPVG AAVHAAVAID YLSKHASSM
001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL
Arabidopsis Description
ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.