Factsheet for Zm00001d019306_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96149	Sorghum	endoplasmic reticulum	87.13	85.97
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	78.1	81.99
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	78.33	81.65
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	77.43	81.28
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	76.07	79.67
Zm00001d015731_P001	Maize	endoplasmic reticulum	72.46	73.96
Os07t0249900-01	Rice	cytosol, plasma membrane	25.96	72.33
Zm00001d012887_P001	Maize	cytosol	62.98	68.38
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	68.17	68.33
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	58.01	59.63
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	54.63	55.76
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	53.5	55.24
PGSC0003DMT400079045	Potato	endoplasmic reticulum	54.4	55.02
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	53.05	53.41
PGSC0003DMT400081932	Potato	endoplasmic reticulum	33.86	52.63
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	51.92	52.51
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	28.44	51.22
Zm00001d003002_P001	Maize	extracellular	49.66	51.04
PGSC0003DMT400081926	Potato	endoplasmic reticulum	27.99	51.03
CDY28718	Canola	endoplasmic reticulum	50.11	50.92
Bra040608.1-P	Field mustard	endoplasmic reticulum	49.89	50.57
CDY51525	Canola	endoplasmic reticulum	49.89	50.23
AT3G02875.1	Thale cress	endoplasmic reticulum	49.21	49.32
Zm00001d011687_P001	Maize	endoplasmic reticulum	49.21	49.21
Zm00001d043701_P001	Maize	mitochondrion	49.44	48.99
Zm00001d044225_P001	Maize	extracellular	47.63	46.89
Zm00001d014562_P001	Maize	endoplasmic reticulum	48.53	44.7
GSMUA_Achr8P32890_001	Banana	cytosol	55.76	42.59

Protein Annotations

EntrezGene:100383476	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	EMBL:BT067315
InterPro:Bact_exopeptidase_dim_dom	UniProt:C0PG96	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	MEROPS:M20.A02	ProteinID:ONM52658.1	PFAM:PF01546	PFAM:PF07687	PIRSF:PIRSF005962
PANTHER:PTHR11014	PANTHER:PTHR11014:SF113	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031
SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI000195CA5B	EnsemblPlantsGene:Zm00001d019306	EnsemblPlants:Zm00001d019306_P001	EnsemblPlants:Zm00001d019306_T001
SEG:seg	:	:	:	:	:

Description

IAA-amino acid hydrolase ILR1

Coordinates

chr7:+:26934723..26940001

Molecular Weight (calculated)

46840.8 Da

IEP (calculated)

6.195

GRAVY (calculated)

0.068

Length

443 amino acids

Sequence
(BLAST)

001: MASSSSSSSS SSSSSSSSRF LLPLLLLCSH LSLASAEEAA SAAADLLSEA RAPGFAAWLR GVRRRIHQRP ELAFQEFRTS ELVRAELDAI GVPYRWPVAQ
101: TGVVATIAGA AAGPVVALRA DMDALPVQEL VDWEHKSQES GKMHACGHDV HTTMLLGAAR ILQDRKSDLM GTVKLVFQPA EEGQGGAYYV LQEGVLDDAS
201: AIFGLHVDPA LPVGVVSSRP GPFAATSGRF LATVTGKGGH AAMPHESIDP VVAAATTVVS LQKIISREID PLQGAVVSVT FLKGGEAYNV IPENVAFGGT
301: MRSMTNEGLS YLKKRIKEIV EGQAAVHHCS ASVDFMEDTM KPYPAVVNDE GMYAHAKEVA EGLLGEKNVR VGPQVMGAED FGFYAQRMAG AFFTIGVGNA
401: STMATIHSTH SPHFVVDEDV LPVGAAFHAA VAIEYVRKNR AST

Best Arabidopsis Sequence Match ( AT3G02875.1 )
(BLAST)

001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL

Arabidopsis Description

ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.