Factsheet for PGSC0003DMT400081926

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081932	Potato	endoplasmic reticulum	96.3	82.11
TraesCS4A01G355300.1	Wheat	cytosol	47.33	39.66
PGSC0003DMT400079045	Potato	endoplasmic reticulum	70.37	39.04
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	60.49	34.27
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	56.38	31.79
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	54.32	30.91
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	54.32	30.84
EER93137	Sorghum	cytosol	50.62	30.52
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	54.32	30.41
Zm00001d012887_P001	Maize	cytosol	51.03	30.39
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	53.09	30.21
TraesCS5B01G517000.1	Wheat	cytosol	50.62	29.93
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	51.03	29.18
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	50.62	29.15
TraesCS5D01G517000.1	Wheat	cytosol	48.56	29.14
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	45.27	29.1
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	50.21	28.91
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	50.21	28.84
PGSC0003DMT400069509	Potato	endoplasmic reticulum	51.03	28.84
EER93138	Sorghum	cytosol	49.38	28.78
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	50.62	28.54
Zm00001d015731_P001	Maize	endoplasmic reticulum	50.62	28.34
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	50.21	28.31
EER96147	Sorghum	mitochondrion	51.44	28.22
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	44.44	28.05
PGSC0003DMT400000925	Potato	endoplasmic reticulum	51.44	28.03
Zm00001d019306_P001	Maize	plastid	51.03	27.99
EER96149	Sorghum	endoplasmic reticulum	51.44	27.84
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	50.21	27.6
EER96151	Sorghum	endoplasmic reticulum	50.21	27.35
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	27.57	27.24
TraesCS4A01G355400.1	Wheat	cytosol	46.5	27.03
PGSC0003DMT400006691	Potato	endoplasmic reticulum	48.97	26.74
Os07t0249700-01	Rice	plasma membrane	48.97	26.21
TraesCS5B01G517200.1	Wheat	plastid	46.91	25.39
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	48.15	25.38
EES15570	Sorghum	endoplasmic reticulum	45.68	24.78
PGSC0003DMT400076719	Potato	cytosol	35.39	24.57
HORVU5Hr1G027710.1	Barley	cytosol	32.1	24.15
PGSC0003DMT400040310	Potato	endoplasmic reticulum	44.03	24.1
TraesCS5D01G113000.2	Wheat	cytosol	31.28	23.53
GSMUA_Achr8P32890_001	Banana	cytosol	55.56	23.28
Os07t0249800-01	Rice	cytosol	18.11	15.55
Os03t0836800-01	Rice	cytosol, plastid	16.46	14.49
Os07t0249900-01	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400081926	EnsemblPlantsGene:PGSC0003DMG401032161	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Amidohydrolase	InterPro:Peptidase_M20	PANTHER:PTHR11014
PANTHER:PTHR11014:SF108	PFAM:PF01546	PGSC:PGSC0003DMG401032161	SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF53187
TIGRFAMs:TIGR01891	TMHMM:TMhelix	UniParc:UPI000294B16C	UniProt:M1D5B6	MapMan:19.4.5.6.6	:

Description

Iaa-amino acid hydrolase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG401032161]

Coordinates

chr1:-:1044463..1048743

Molecular Weight (calculated)

27282.2 Da

IEP (calculated)

7.129

GRAVY (calculated)

-0.035

Length

243 amino acids

Sequence
(BLAST)

001: MGSLSTNLFF FLCIFLLVLT IFPYNSLAVE ETLLRSETEL LTHELLESAK QPKFFDWLKR VRRRIHEYPE LAFEEYKTSQ FVRDELDLLG IEYVSPVAKT
101: GLVGTVGSGR QPWFGLRADM DALPMQELVD SEYKSKINGK MHACGHDAHV TMLLGAARLL QNRRDKLKGT VKLVFQPAEE GYAGASYMIE EGALDGVKAI
201: FGMHVWPFIP TGIIGSRPGP IMAGAGRFTA IMARERWTCS NTT

Best Arabidopsis Sequence Match ( AT1G44350.1 )
(BLAST)

001: MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP
101: ELAFEEYETS RLIRSELDRM GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH VTMLLGAAHI LKAREHLLKG
201: TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV
301: VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM
401: GAEDFAFYSE IIPAAFYFIG IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS

Arabidopsis Description

ILL6IAA-amino acid hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WNN8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.