Factsheet for TraesCS5B01G517200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

mitochondrion 3
plastid 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G355400.1	Wheat	cytosol	87.97	94.5
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	90.2	87.85
TraesCS5B01G517000.1	Wheat	cytosol	74.16	81.02
EER93137	Sorghum	cytosol	69.71	77.67
EER93138	Sorghum	cytosol	71.27	76.74
Zm00001d012887_P001	Maize	cytosol	69.04	75.98
Os03t0836800-01	Rice	cytosol, plastid	43.88	71.38
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	61.69	65.64
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	62.14	65.34
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	55.68	64.94
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	59.02	61.48
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	55.46	57.77
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	52.34	54.78
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	51.22	52.51
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	50.78	51.82
PGSC0003DMT400079045	Potato	endoplasmic reticulum	50.11	51.37
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	49.0	50.69
PGSC0003DMT400081932	Potato	endoplasmic reticulum	31.18	49.12
CDY28718	Canola	endoplasmic reticulum	47.66	49.08
TraesCS3B01G283900.1	Wheat	endoplasmic reticulum	47.22	48.96
TraesCS2B01G396400.1	Wheat	endoplasmic reticulum	45.43	48.46
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	47.22	48.4
Bra040608.1-P	Field mustard	endoplasmic reticulum	46.99	48.28
AT3G02875.1	Thale cress	endoplasmic reticulum	47.22	47.96
CDY51525	Canola	endoplasmic reticulum	46.99	47.95
PGSC0003DMT400081926	Potato	endoplasmic reticulum	25.39	46.91
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	43.21	44.6
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	24.28	44.31
GSMUA_Achr8P32890_001	Banana	cytosol	55.23	42.76
TraesCS7B01G335500.1	Wheat	endoplasmic reticulum	44.99	41.74

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF99	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	TIGRFAMs:TIGR01891	EnsemblPlantsGene:TraesCS5B01G517200	EnsemblPlants:TraesCS5B01G517200.1	TIGR:cd08017	SEG:seg

Description

No Description!

Coordinates

chr5B:+:680767140..680769923

Molecular Weight (calculated)

47511.3 Da

IEP (calculated)

6.833

GRAVY (calculated)

0.099

Length

449 amino acids

Sequence
(BLAST)

001: MPHLINLSQV TCARAHLPIS SRLVETTRSA GDRSMAAAAA LGPELLEEAR APGFAAWLRG LRRQIHQHPE LAFQEHRTSA LVRAELDALG VPYVWPIVRT
101: GVVATISGGV PGPVFALRAD MDALPIQEMV EWEFKSKEDG KMHACGHDAH TAMLLGAAKL LQSRKDGLAG TVKLVFQPAE ESHAGGYHVL QSGVLDDVAA
201: IFAVHIDTHL RAGAVGSRPG PFLAGSARFK ATITGKGGHG AMPHAAVDPV VAACSAVLSL QQLVARETDP LQGAVVSVTT IRGGETFNVI PESVTLGGTF
301: RSMTTPGMRY LMRRIREVVE GQAAVARCAA TVDFMEEELR PYPATVNDEG VYAHARAVAE GMLGAANVRL SPQIMAAEDF GFYAEKIPAA FFGLGVRAGG
401: EEDEVHHVHT PRMVISEDAL PVGAALHAAV AIEFLSKRAR ATASPPVAA

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.