Factsheet for Solyc06g054410.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079045	Potato	endoplasmic reticulum	97.47	96.58
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	45.39	80.08
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	61.98	62.7
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	51.38	58.99
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	58.53	58.93
Zm00001d012887_P001	Maize	cytosol	55.3	58.82
HORVU5Hr1G027710.1	Barley	cytosol	43.55	58.51
EER93137	Sorghum	cytosol	54.15	58.31
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	51.38	57.92
TraesCS5D01G113000.2	Wheat	cytosol	43.09	57.89
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	56.68	57.88
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	56.91	57.85
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	56.91	57.85
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	56.22	57.68
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	55.99	57.58
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	55.99	57.58
TraesCS5D01G517000.1	Wheat	cytosol	53.46	57.28
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	56.45	57.24
TraesCS5B01G517000.1	Wheat	cytosol	54.15	57.18
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	56.91	56.91
EER93138	Sorghum	cytosol	54.38	56.59
Os07t0249800-01	Rice	cytosol	36.87	56.54
TraesCS4A01G355300.1	Wheat	cytosol	37.56	56.21
Os03t0836800-01	Rice	cytosol, plastid	35.71	56.16
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	54.84	55.22
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	54.84	55.22
Zm00001d015731_P001	Maize	endoplasmic reticulum	54.84	54.84
Zm00001d019306_P001	Maize	plastid	55.76	54.63
EER96151	Sorghum	endoplasmic reticulum	55.53	54.04
EER96149	Sorghum	endoplasmic reticulum	55.53	53.67
Os07t0249900-01	Rice	cytosol, plasma membrane	19.59	53.46
EER96147	Sorghum	mitochondrion	54.38	53.27
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	53.92	52.94
TraesCS4A01G355400.1	Wheat	cytosol	50.92	52.87
Os07t0249700-01	Rice	plasma membrane	54.38	51.98
EES15570	Sorghum	endoplasmic reticulum	52.53	50.89
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	49.54	50.0
TraesCS5B01G517200.1	Wheat	plastid	50.69	49.0
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	51.84	48.81
Solyc12g008690.1.1	Tomato	endoplasmic reticulum	48.85	47.53
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	48.16	46.97
Solyc05g006220.2.1	Tomato	endoplasmic reticulum	45.16	44.14
GSMUA_Achr8P32890_001	Banana	cytosol	58.06	43.45
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	44.7	40.0

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:K4C6C7	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF108	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc06g054410.2	EnsemblPlants:Solyc06g054410.2.1	TIGRFAMs:TIGR01891
UniParc:UPI0002765B77	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:37188009..37192468

Molecular Weight (calculated)

48084.6 Da

IEP (calculated)

6.054

GRAVY (calculated)

-0.120

Length

434 amino acids

Sequence
(BLAST)

001: MGSFCINLTL ILALLSTSFS YNSWAVDVDT NLGSETELLT RELMESARQP EFLDWLTRTR RRIHEYPELS FQEYQTSQFI RNELDSLGIK YLWPVAKTGV
101: VGTIGSGAQP WFGLRADMDA LPIQELVDWE CKSKIDGKMH ACGHDAHVTM LLGAARLIQN RRDKLKLVFQ PAEEGYAGAS YMLEEGALDG FQAMFGLHVW
201: PFMPVGTIAS KPGPIMAGSS RFTVIMQGKG GHAATPHNTR DPILAVSMTV LALQQLVSRE TDPLEPRVLT VAFVDGGQAG NVIPESVRFG GTFRFMTLEG
301: YSYLKQRIKE IIETQAGVHQ CSATVNFMEE MRPYPPTIND PKIYDHSKRV GEILLGNNNV QHSPASMAAE DFGFYSQRMA TAFFFIGTQN KTTSSSVKGL
401: HSPYFTIDEE VLPVGAALHA AVAISYLDTH LKSE

Best Arabidopsis Sequence Match ( AT3G02875.1 )
(BLAST)

001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL

Arabidopsis Description

ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.