Factsheet for Solyc05g006220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 3
mitochondrion 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040310	Potato	endoplasmic reticulum	95.27	95.27
KRG99236	Soybean	endoplasmic reticulum	63.74	64.17
KRH45754	Soybean	endoplasmic reticulum	63.51	63.66
GSMUA_Achr9P14470_001	Banana	endoplasmic reticulum, vacuole	56.98	54.88
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	52.7	52.58
Solyc12g008690.1.1	Tomato	endoplasmic reticulum	52.03	51.79
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	47.3	48.84
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	50.23	45.98
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	44.14	45.16
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	67.57	32.79

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:K4BWE9	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF139	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc05g006220.2	EnsemblPlants:Solyc05g006220.2.1	TIGRFAMs:TIGR01891
UniParc:UPI00027671D8	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5:-:883041..887278

Molecular Weight (calculated)

49084.0 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.101

Length

444 amino acids

Sequence
(BLAST)

001: MGTKKVLVSV MFSMFMFFSS GREEECLNPF LIDQNIFAKD YIINLANDTE TVKWMKKIRR QIHENPELAY EEFMTSALIR EELDRMGVKY RWPVAKTGVV
101: AAIGSGKPPF VALRADMDAL PIQELSNWEH KSKIDGKMHA CAHDAHTTML LGAAKILQQL QHNLQGTVVL IFQPAEERGH GAKDMIDEGV LENVEAIFGL
201: HLVHKYSSGI VASRAGEFLA GCGSFKATIR GKGGHAAIPQ DTVDPILAAS TSVISLQSIV SREADPLESQ VVSVAMIQGG SSFNVIPDSA TISGTYRAFS
301: KESFYGLRKR IEEIVRAQAA VHRCTVEIDF DGRENPTVPP TINNEKIYKH ARKVSKMIVG EENYKLASSF MGSEDFAVFL ENIPGSLFFL GTKNEKIGAI
401: YPPHNPNFFI DEDVLPIGAA IHATFAYTYL LNSTNKCINS HSSY

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.