Factsheet for Solyc12g008690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 8
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000925	Potato	endoplasmic reticulum	95.07	95.07
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	71.3	72.44
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	46.64	70.03
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	67.04	68.26
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	67.49	67.64
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	61.66	63.51
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	61.21	62.76
Os01t0560000-01	Rice	plasma membrane	62.11	62.67
Zm00001d044225_P001	Maize	extracellular	63.23	62.67
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	61.44	62.13
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	61.44	62.13
OQU87019	Sorghum	endoplasmic reticulum	63.9	57.93
Solyc05g006220.2.1	Tomato	endoplasmic reticulum	51.79	52.03
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	47.53	48.85
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	46.19	47.91
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	50.45	46.39

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	UniProt:K4DBV7	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF119	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g008690.1	EnsemblPlants:Solyc12g008690.1.1	TIGRFAMs:TIGR01891
UniParc:UPI000276957B	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:2064426..2068579

Molecular Weight (calculated)

48865.1 Da

IEP (calculated)

6.513

GRAVY (calculated)

0.046

Length

446 amino acids

Sequence
(BLAST)

001: MVFLKWVVAF SILCNFLATP TLSISSILNK EELANISVNF LNLAKRPELF DWIVRIRRTI HENPELGFEE FETSKLIRNE LDKMGIFYKY PVAVTGVVGF
101: SGTGKPPFVA LRADMDALAM QEEVDWEHKS KIPGKMHACG HDAHVAMLLG AAKILQEQRD ILQGTVLLVF QPAEEGGGGA KKMLESGILD NVDAIFGLHI
201: SPMSPIGTVA ASSGPIMAGS GFFEAVIKGK GGHAAIPQHT IDPILAASNI VVSLQHLVSR ETDPLDSQVV TVAKFKGGGA FNVIPDSVTI GGTFRAFSKE
301: SFAQLKQRIV EVITRQAAVQ RCNATVDFDT KNRPFYPVTV NNKALHEQFR NVAGQMLGID KIIAMKPTMG TEDFSFFAEA IPGCFYLLGM VDETKGRFES
401: GHSPFYRVNE DVLPYGVALH ASLATTYLLE HQLKSTTRDQ NVHDEL

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.