Factsheet for VIT_11s0016g02700.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 2
mitochondrion 1
endoplasmic reticulum 6
extracellular 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000925	Potato	endoplasmic reticulum	73.8	72.65
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	72.21	71.88
Solyc12g008690.1.1	Tomato	endoplasmic reticulum	72.44	71.3
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	46.24	68.35
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	67.43	67.58
Os01t0560000-01	Rice	plasma membrane	67.2	66.74
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	64.92	65.82
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	65.15	65.75
Zm00001d044225_P001	Maize	extracellular	66.97	65.33
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	65.38	65.08
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	64.69	64.4
OQU87019	Sorghum	endoplasmic reticulum	67.2	59.96
VIT_16s0098g00770.t01	Wine grape	cytosol	36.45	49.84
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	49.43	49.54
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	48.29	49.42
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	49.43	49.32
VIT_18s0001g02570.t01	Wine grape	endoplasmic reticulum	53.99	48.67
VIT_16s0098g00780.t01	Wine grape	mitochondrion	43.28	48.22
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	53.76	25.79

Protein Annotations

EntrezGene:100247351	wikigene:100247351	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	EMBL:AM478905
InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	ProteinID:CAN61999	ProteinID:CAN61999.1	ProteinID:CCB51470	ProteinID:CCB51470.1
UniProt:F6HGX2	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	EntrezGene:LOC100247351	wikigene:LOC100247351	MEROPS:M20.014	MEROPS:M20.A04	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF119	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGR:TC67370	TIGRFAMs:TIGR01891	UniParc:UPI00015C8C58
ArrayExpress:VIT_11s0016g02700	EnsemblPlantsGene:VIT_11s0016g02700	EnsemblPlants:VIT_11s0016g02700.t01	RefSeq:XP_002283047	RefSeq:XP_002283047.1	:

Description

No Description!

Coordinates

chr11:-:2147043..2151343

Molecular Weight (calculated)

48347.1 Da

IEP (calculated)

5.805

GRAVY (calculated)

-0.059

Length

439 amino acids

Sequence
(BLAST)

001: MGLGNWLRSI FILHMFVATL SSSNPERLAQ ISADFLDYAR EPEISEWMVG IRRIIHENPE LGFEEFETSK LIRTELDKMD IPYRFPVAVT GVVGFIGTGE
101: PPFVAIRADM DALPMQEGVE WEHKSKIPGK MHACGHDAHV AMLLGAAKML QKHRHDLQGT VVLVFQPAEE RDGGAKKMLE TGILENIDAI FGLHVSPRVP
201: IGSVASRSGP VLAACGFFDA VISGKGGHAA LPQHSIDPIL AASNVIVSLQ QLVSREADPL DSQVVTVAKF KGGGAFNVIP DSVTIGGTFR AFSKESFLQL
301: KQRIEEVITL QSSVQRCNAT VHFNDPFYPV TANNKDLHKH FQNVAGDMLG TQNIKEMPLV MGAEDFSFFA EAIPGYFYYL GMKNETRGQL ELGHTPYYTV
401: NEDALPYGAA LHASLATRYL LEYQQPIITS PKESLHDEL

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.