Factsheet for TraesCS3D01G207700.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	96.6	97.93
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	95.92	97.69
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	95.01	95.01
Os01t0560000-01	Rice	plasma membrane	86.17	85.97
Zm00001d044225_P001	Maize	extracellular	85.03	83.33
OQU87019	Sorghum	endoplasmic reticulum	85.94	77.03
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	49.43	73.4
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	72.34	72.83
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	65.99	65.99
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	65.08	65.38
CDY69786	Canola	endoplasmic reticulum, extracellular	53.06	65.36
PGSC0003DMT400006691	Potato	endoplasmic reticulum	65.53	64.94
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	65.08	64.49
KRH23345	Soybean	endoplasmic reticulum	64.85	64.41
AT1G51760.1	Thale cress	endoplasmic reticulum	63.49	63.64
CDY22869	Canola	endoplasmic reticulum	63.49	63.35
KRH09985	Soybean	endoplasmic reticulum	63.72	63.29
Bra018932.1-P	Field mustard	endoplasmic reticulum	63.27	63.12
PGSC0003DMT400000925	Potato	endoplasmic reticulum	63.04	62.33
CDY43926	Canola	endoplasmic reticulum	62.59	62.16
CDX87841	Canola	endoplasmic reticulum	62.59	62.16
Bra030419.1-P	Field mustard	endoplasmic reticulum	62.59	62.16
Solyc12g008690.1.1	Tomato	endoplasmic reticulum	62.13	61.44
TraesCS3D01G252900.1	Wheat	endoplasmic reticulum	59.86	60.97
AT1G51780.1	Thale cress	endoplasmic reticulum	59.64	60.46
KRH44214	Soybean	endoplasmic reticulum	62.59	59.23
KRH44216	Soybean	extracellular	57.82	59.16
KRH47175	Soybean	endoplasmic reticulum	58.5	58.37
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	58.05	58.05
KRH44217	Soybean	endoplasmic reticulum, golgi	58.28	58.01
Bra006863.1-P	Field mustard	endoplasmic reticulum	57.6	57.86
CDX88581	Canola	endoplasmic reticulum	57.14	57.4
KRH44220	Soybean	cytosol	34.24	55.93
CDY11910	Canola	endoplasmic reticulum	53.74	55.5
AT5G56660.1	Thale cress	endoplasmic reticulum	54.88	55.13
Bra002800.1-P	Field mustard	endoplasmic reticulum	55.33	54.95
CDY32768	Canola	endoplasmic reticulum	55.33	54.95
CDY32874	Canola	endoplasmic reticulum	55.1	54.24
AT5G56650.1	Thale cress	endoplasmic reticulum	53.74	54.11
KRH47173	Soybean	cytosol, plastid	21.09	50.54
TraesCS5D01G517000.1	Wheat	cytosol	45.8	49.88
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	47.85	49.65
TraesCS5D01G113000.2	Wheat	cytosol	35.83	48.92
KRH44221	Soybean	endoplasmic reticulum, extracellular	21.77	48.48
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	46.94	48.48
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	41.5	48.41
KRH44218	Soybean	golgi	57.37	47.47
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	46.71	47.47
TraesCS7D01G426400.1	Wheat	plastid	50.11	46.72
TraesCS2D01G375700.1	Wheat	endoplasmic reticulum	43.31	45.91
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	42.4	42.6
CDY42210	Canola	mitochondrion	14.97	38.6

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	PFAM:PF01546
PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF55	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3D01G207700
EnsemblPlants:TraesCS3D01G207700.2	TIGR:cd08017	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3D:-:274364632..274369245

Molecular Weight (calculated)

47790.4 Da

IEP (calculated)

5.562

GRAVY (calculated)

-0.047

Length

441 amino acids

Sequence
(BLAST)

001: MAAYAGLLRV ALVLIAAAAT WAAALDDPAG LLRRAKEAEF MDWMVGVRRR IHENPELGYE EFDTSELVRR ELDAMGIPYR HPFAVTGVVA TVGTGGPPFV
101: ALRADMDALP MQESVEWEHK SKVPGKMHGC GHDAHVAMLL GSAKILQEHR DELKGTVALL FQPAEEGGGG AKKMVEAGAV ENIEVMFGLH VADSVPIGVL
201: ASRPGPIMAG SGFFEAVISG KGGHAALPHH TIDPILAASN VIVSLQQLVS READPLDSQV VTVGKFQGGG AFNVIPDSVT IGGTFRAFMK ESFNQLKQRI
301: EEVTTRVIVT QASVQRCSAV VDFLDKDKPF FPPTINNPEL HDFFAKVCSE MVGPNNVREK QPLMGAEDFS FYTEAVPKTY YYFVGMLNET RGPQAPHHSP
401: YFTINEDALP YGAAMQASLA ARYLLEHQPA TAAKVEPRDE L

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.