CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32768	Canola	endoplasmic reticulum	91.52	92.34
CDY11910	Canola	endoplasmic reticulum	79.69	83.61
CDY42210	Canola	mitochondrion	31.03	81.29
CDX88581	Canola	endoplasmic reticulum	78.35	79.95
AT5G56660.1	Thale cress	endoplasmic reticulum	76.56	78.13
AT5G56650.1	Thale cress	endoplasmic reticulum	74.78	76.48
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	43.97	66.33
CDY69786	Canola	endoplasmic reticulum, extracellular	51.12	63.97
CDX87841	Canola	endoplasmic reticulum	60.27	60.81
CDY43926	Canola	endoplasmic reticulum	60.04	60.59
CDY22869	Canola	endoplasmic reticulum	59.38	60.18
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	58.26	59.59
Os01t0560000-01	Rice	plasma membrane	55.13	55.88
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	53.57	55.43
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	53.79	55.4
Zm00001d044225_P001	Maize	extracellular	55.58	55.33
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	54.24	55.1
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	54.02	54.88
OQU87019	Sorghum	endoplasmic reticulum	56.03	51.02
CDY12538	Canola	cytosol, endoplasmic reticulum	31.25	47.78
CDY28718	Canola	endoplasmic reticulum	44.42	45.64
CDY51525	Canola	endoplasmic reticulum	44.42	45.23
CDY14979	Canola	endoplasmic reticulum	45.09	43.82
CDY14333	Canola	endoplasmic reticulum	41.07	43.09
CDY60579	Canola	endoplasmic reticulum	40.62	42.42
CDY09109	Canola	cytoskeleton, cytosol, vacuole	5.13	32.39
CDX90411	Canola	cytoskeleton, cytosol, vacuole	5.13	32.39

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:A0A078H5W7	UniProt:A0A078H5W7	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlants:CDY32874	ProteinID:CDY32874	ProteinID:CDY32874.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00053003001	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF119	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0004EEEC8C	SEG:seg	:

Description

BnaC09g33210DBnaC09g33210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5W7]

Coordinates

chrLK032301:+:165405..167210

Molecular Weight (calculated)

49058.9 Da

IEP (calculated)

6.803

GRAVY (calculated)

-0.071

Length

448 amino acids

Sequence
(BLAST)

001: MANLNNLLLF TLTFQLLFSL HVSSESSHTT GDASQFPKKF LELAKTPEVF DWMVRIRRKI HENPELGYQE FETSKLIRSE LDIIGVKYRH PVAVTGVIGY
101: IGTGEPPFVA LRADMDALTM QEGVEWEHKS KVAGKMHACA HDGHVAMLLG AAKLLQQHRH VLQGTVVLIF QPAEEGLGGA KKMIEEGALK HVEAIFGIHF
201: TNRVPLGKAA SRPGSMLAGS AFFEAVITGK GGHAAIPQHT VDPVIAASSV VLSLQHLVSR ETDPLDSKVV TVSKVNGGDA FNVIPDSVTI GGTLRAFTSF
301: SQLEQRVKEV ITNQATVHRC NASVNLRPNG KEPLPPTVND VGLYKQFKNM VGDLLGEESF VEASPIMGGE DFSYFAEAIP GHFAFLGMQD ETKSYASAHS
401: SLYRVNEDAL HYGAAVHASM AVQYLKDPIN QKAFMTNFEV TQRQVFHW

Best Arabidopsis Sequence Match ( AT5G56660.1 )
(BLAST)

001: MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG
101: TGEPPFVALR ADMDALPIQE GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK MREEGALKNV EAIFGIHLSA
201: RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ
301: LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL
401: YRINEDVLPY GAAIHASMAV QYLKEKASKG SVSGFHEEL

Arabidopsis Description

ILL2At5g56660 [Source:UniProtKB/TrEMBL;Acc:Q5HZ30]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.