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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 4
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 5
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G232800.1 Wheat endoplasmic reticulum 94.56 95.86
TraesCS3A01G204400.1 Wheat endoplasmic reticulum 94.1 95.84
TraesCS3D01G207700.2 Wheat endoplasmic reticulum 95.01 95.01
Os01t0560000-01 Rice plasma membrane 86.85 86.65
Zm00001d044225_P001 Maize extracellular 85.03 83.33
OQU87019 Sorghum endoplasmic reticulum 86.17 77.24
GSMUA_Achr7P24240_001 Banana endoplasmic reticulum 49.43 73.4
GSMUA_Achr4P15750_001 Banana endoplasmic reticulum 72.34 72.83
VIT_11s0016g02700.t01 Wine grape endoplasmic reticulum 64.4 64.69
VIT_09s0002g02630.t01 Wine grape endoplasmic reticulum 64.63 64.63
CDY69786 Canola endoplasmic reticulum, extracellular 52.38 64.53
PGSC0003DMT400006691 Potato endoplasmic reticulum 64.85 64.27
KRH23345 Soybean endoplasmic reticulum 64.63 64.19
Solyc03g121270.2.1 Tomato endoplasmic reticulum, plastid 64.4 63.82
KRH09985 Soybean endoplasmic reticulum 63.27 62.84
AT1G51760.1 Thale cress endoplasmic reticulum 62.59 62.73
CDY22869 Canola endoplasmic reticulum 62.36 62.22
PGSC0003DMT400000925 Potato endoplasmic reticulum 62.81 62.11
Bra018932.1-P Field mustard endoplasmic reticulum 62.13 61.99
Solyc12g008690.1.1 Tomato endoplasmic reticulum 62.13 61.44
CDY43926 Canola endoplasmic reticulum 61.68 61.26
Bra030419.1-P Field mustard endoplasmic reticulum 61.68 61.26
CDX87841 Canola endoplasmic reticulum 61.45 61.04
AT1G51780.1 Thale cress endoplasmic reticulum 58.96 59.77
KRH44214 Soybean endoplasmic reticulum 62.81 59.44
KRH44216 Soybean extracellular 57.82 59.16
KRH47175 Soybean endoplasmic reticulum 58.96 58.82
KRH47174 Soybean endoplasmic reticulum, golgi, vacuole 58.5 58.5
KRH44217 Soybean endoplasmic reticulum, golgi 58.05 57.79
Bra006863.1-P Field mustard endoplasmic reticulum 57.14 57.4
CDX88581 Canola endoplasmic reticulum 56.69 56.95
AT5G56660.1 Thale cress endoplasmic reticulum 55.78 56.04
CDY11910 Canola endoplasmic reticulum 53.74 55.5
HORVU3Hr1G066450.8 Barley endoplasmic reticulum, mitochondrion 59.86 55.11
KRH44220 Soybean cytosol 33.56 54.81
Bra002800.1-P Field mustard endoplasmic reticulum 55.1 54.73
CDY32768 Canola endoplasmic reticulum 55.1 54.73
AT5G56650.1 Thale cress endoplasmic reticulum 54.2 54.57
CDY32874 Canola endoplasmic reticulum 54.88 54.02
KRH47173 Soybean cytosol, plastid 21.09 50.54
HORVU5Hr1G055060.6 Barley endoplasmic reticulum 46.94 48.94
KRH44218 Soybean golgi 58.05 48.03
HORVU5Hr1G027710.1 Barley cytosol 35.15 47.99
KRH44221 Soybean endoplasmic reticulum, extracellular 21.54 47.98
HORVU7Hr1G099640.2 Barley plastid 16.78 47.74
HORVU7Hr1G099580.2 Barley cytosol, mitochondrion 41.04 46.29
HORVU2Hr1G089950.3 Barley endoplasmic reticulum 44.22 45.35
HORVU5Hr1G118040.2 Barley mitochondrion, plastid 44.67 42.73
HORVU2Hr1G090000.1 Barley endoplasmic reticulum, golgi, mitochondrion 43.31 42.54
CDY42210 Canola mitochondrion 14.29 36.84
Protein Annotations
MapMan:19.4.5.6.6Gene3D:3.30.70.360Gene3D:3.40.630.10EMBL:AK361432EMBL:AK363101InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_domUniProt:F2DC17GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016787EnsemblPlantsGene:HORVU3Hr1G048560EnsemblPlants:HORVU3Hr1G048560.1PFAM:PF01546PFAM:PF07687PIRSF:PIRSF005962
PANTHER:PTHR11014PANTHER:PTHR11014:SF55InterPro:Peptidase_M20InterPro:Peptidase_M20_dimerSUPFAM:SSF53187SUPFAM:SSF55031
SignalP:SignalP-noTMTIGRFAMs:TIGR01891TMHMM:TMhelixUniParc:UPI0002006325SEG:seg:
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DC17]
Coordinates
chrchr3H:+:335669263..335675230
Molecular Weight (calculated)
47751.6 Da
IEP (calculated)
5.711
GRAVY (calculated)
0.027
Length
441 amino acids
Sequence
(BLAST)
001: MAAGASPLLL LRVALVLIAA AAAWAAALDD PAGLLRRAKE AEFLDWMVGV RRRIHENPEL GYEEFATSEL VRRELDAMGI PYRHPFALTG VVATVGTGGP
101: PFVALRADMD ALPMQESVEW EHKSKVPGKM HGCGHDAHVA MLLGSAKILQ EHRDELKGTV VLLFQPAEEG GGGAKKMVEA GAVENIEVMF GIHVADTVPI
201: GVLASRPGPI MAGSGFFEAV ISGKGGHAAL PHHTIDPILA ASNVIVSLQQ LVSREADPLD SQVVTVGKFQ GGGAFNVIPD SVTIGGTFRA FLKESFNQLK
301: QRIEEVIVTQ ASVQRCSAVV DFLDKDRPFF PPTINNPELH DFFVKVGSEM VGPNKVREKQ PLMGAEDFSF YTEVVPKTYY YFVGMLNETR GPQAPHHSPY
401: FTINEDTLPY GAAMQASLAA RYLLEHQLVT AAKVVEPRDE L
Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)
001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL
Arabidopsis Description
ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.