Factsheet for TraesCS3A01G204400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	96.54	96.09
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	97.69	95.92
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	95.84	94.1
Os01t0560000-01	Rice	plasma membrane	87.07	85.29
Zm00001d044225_P001	Maize	extracellular	84.99	81.78
OQU87019	Sorghum	endoplasmic reticulum	86.61	76.22
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	72.52	71.69
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	48.96	71.38
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	66.28	65.08
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	65.82	64.92
CDY69786	Canola	endoplasmic reticulum, extracellular	53.58	64.8
PGSC0003DMT400006691	Potato	endoplasmic reticulum	66.05	64.27
KRH23345	Soybean	endoplasmic reticulum	65.36	63.74
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	65.36	63.6
AT1G51760.1	Thale cress	endoplasmic reticulum	64.2	63.18
KRH09985	Soybean	endoplasmic reticulum	64.2	62.61
CDY22869	Canola	endoplasmic reticulum	63.74	62.44
Bra018932.1-P	Field mustard	endoplasmic reticulum	63.51	62.22
PGSC0003DMT400000925	Potato	endoplasmic reticulum	63.97	62.11
Solyc12g008690.1.1	Tomato	endoplasmic reticulum	63.51	61.66
CDY43926	Canola	endoplasmic reticulum	63.05	61.49
CDX87841	Canola	endoplasmic reticulum	63.05	61.49
Bra030419.1-P	Field mustard	endoplasmic reticulum	63.05	61.49
AT1G51780.1	Thale cress	endoplasmic reticulum	60.51	60.23
KRH44216	Soybean	extracellular	58.89	59.16
KRH44214	Soybean	endoplasmic reticulum	63.05	58.58
KRH47175	Soybean	endoplasmic reticulum	59.35	58.14
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	58.89	57.82
KRH44217	Soybean	endoplasmic reticulum, golgi	59.12	57.79
Bra006863.1-P	Field mustard	endoplasmic reticulum	57.97	57.18
CDX88581	Canola	endoplasmic reticulum	57.51	56.72
KRH44220	Soybean	cytosol	34.87	55.93
TraesCS4A01G355300.1	Wheat	cytosol	36.95	55.17
AT5G56660.1	Thale cress	endoplasmic reticulum	55.66	54.9
CDY11910	Canola	endoplasmic reticulum	54.04	54.8
CDY32768	Canola	endoplasmic reticulum	55.66	54.28
Bra002800.1-P	Field mustard	endoplasmic reticulum	55.66	54.28
AT5G56650.1	Thale cress	endoplasmic reticulum	54.27	53.65
CDY32874	Canola	endoplasmic reticulum	55.43	53.57
KRH47173	Soybean	cytosol, plastid	21.02	49.46
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	47.81	49.05
KRH44221	Soybean	endoplasmic reticulum, extracellular	22.17	48.48
KRH44218	Soybean	golgi	58.2	47.28
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	46.65	47.2
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	46.65	46.87
TraesCS4A01G355400.1	Wheat	cytosol	44.8	46.41
TraesCS2A01G379500.1	Wheat	endoplasmic reticulum	44.11	45.91
TraesCS7A01G435700.1	Wheat	endoplasmic reticulum	50.35	44.95
TraesCS2A01G379400.1	Wheat	endoplasmic reticulum	43.19	42.79
CDY42210	Canola	mitochondrion	15.01	38.01

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF55	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	TIGRFAMs:TIGR01891	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G204400	EnsemblPlants:TraesCS3A01G204400.1	TIGR:cd08017
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:358873313..358879005

Molecular Weight (calculated)

46904.4 Da

IEP (calculated)

5.854

GRAVY (calculated)

-0.032

Length

433 amino acids

Sequence
(BLAST)

001: MAAYAGLFRV ALVLIAAAAT WAAAAGLLRR AKEAEFMDWM VGVRRRIHEN PELGYEEFAT SELVRRELDA MGIPYRHPFA VTGVVATVGT GGPPFVALRA
101: DMDALPMQES VEWEHKSKVP GKMHGCGHDA HVAMLLGSAR ILQEHRDELK GTVALLFQPA EEGGGGAKKM VEAGAGENIE VMFGLHVADS VPIGVLASRP
201: GPIMAGSGFF EAVISGKGGH AALPHHTIDP ILAASNVIVS LQQLVSREAD PLDSQVVTVG KFQGGGAFNV IPDSVTIGGT FRAFLKESFN QLKQRIEEVI
301: VTQASVQRCS AVVDFLDKDK PFFPPTINNP ELHDFFAKVG SEMVGPNNVR EKQPLMGAED FSFYTEAIPK TYYYFVGMLN ETRGPQAPHH SPYFTINEDT
401: LPYGVAMQAS LAARYLLEHQ PVTAAKVEPR DEL

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.