CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 5
extracellular 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018932.1-P	Field mustard	endoplasmic reticulum	99.09	99.09
CDY69786	Canola	endoplasmic reticulum, extracellular	79.41	98.04
CDY43926	Canola	endoplasmic reticulum	94.12	93.69
CDX87841	Canola	endoplasmic reticulum	93.67	93.24
AT1G51760.1	Thale cress	endoplasmic reticulum	88.01	88.41
AT1G51780.1	Thale cress	endoplasmic reticulum	79.19	80.46
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	69.68	69.84
KRH23345	Soybean	endoplasmic reticulum	68.1	67.79
KRH09985	Soybean	endoplasmic reticulum	67.87	67.57
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	45.25	67.34
PGSC0003DMT400006691	Potato	endoplasmic reticulum	67.42	66.97
Solyc03g121270.2.1	Tomato	endoplasmic reticulum, plastid	66.97	66.52
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	63.57	64.16
KRH44216	Soybean	extracellular	62.22	63.81
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	62.44	63.74
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	62.67	63.68
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	63.35	63.49
CDX88581	Canola	endoplasmic reticulum	62.9	63.33
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	62.22	62.36
KRH47175	Soybean	endoplasmic reticulum	62.22	62.22
Os01t0560000-01	Rice	plasma membrane	61.99	61.99
Zm00001d044225_P001	Maize	extracellular	62.9	61.78
CDY32768	Canola	endoplasmic reticulum	61.99	61.71
KRH44217	Soybean	endoplasmic reticulum, golgi	61.54	61.4
CDY11910	Canola	endoplasmic reticulum	59.28	61.36
KRH44214	Soybean	endoplasmic reticulum	64.03	60.73
KRH47174	Soybean	endoplasmic reticulum, golgi, vacuole	60.41	60.54
CDY32874	Canola	endoplasmic reticulum	60.18	59.38
OQU87019	Sorghum	endoplasmic reticulum	62.67	56.3
KRH44220	Soybean	cytosol	33.71	55.19
KRH44221	Soybean	endoplasmic reticulum, extracellular	23.53	52.53
CDY12538	Canola	cytosol, endoplasmic reticulum	33.48	50.51
KRH44218	Soybean	golgi	59.73	49.53
CDY42210	Canola	mitochondrion	18.33	47.37
KRH47173	Soybean	cytosol, plastid	19.46	46.74
CDY28718	Canola	endoplasmic reticulum	45.48	46.1
CDY51525	Canola	endoplasmic reticulum	45.48	45.68
CDY14979	Canola	endoplasmic reticulum	47.06	45.12
CDY14333	Canola	endoplasmic reticulum	42.76	44.26
CDY60579	Canola	endoplasmic reticulum	42.76	44.06
CDY09109	Canola	cytoskeleton, cytosol, vacuole	6.11	38.03
CDX90411	Canola	cytoskeleton, cytosol, vacuole	6.11	38.03

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:A0A078GC00	UniProt:A0A078GC00	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlants:CDY22869	ProteinID:CDY22869	ProteinID:CDY22869.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00021227001	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF55	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0004EE6614	SEG:seg	:

Description

BnaA06g02080DBnaA06g02080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GC00]

Coordinates

chrLK032136:+:572916..575468

Molecular Weight (calculated)

48287.1 Da

IEP (calculated)

6.409

GRAVY (calculated)

-0.046

Length

442 amino acids

Sequence
(BLAST)

001: MSLCKWVSFL LIIRLLNSSQ ISSSSSLTSN GFSQIPPKFL ALAKRNDFFE WMVGIRRRIH ENPELGYEEV DTSKLVRTEL EKMGVSYKYP VAVTGVVGYV
101: GTGQAPFVAL RADMDALPMQ EMVEWEHKSK VPGKMHACGH DAHTTMLLGA AKLLKEHQDE LQGTVILVFQ PAEEGGGGAK KIVEAGVLKD VSAIFGLHVT
201: NQLGLGLVSS REGPLLAGSG FFEAKISGKG GHAALPQHAI DPILAASNII VTLQHLVSRE ADPLDSQVVT VAKFEGGGAF NVIPDSVTIG GTFRAFSTKS
301: FTQLKKRIEQ VITRQASVHM CNATVDFLQE EKPFFPPTVN DKALHMFFKN VSGDMLGTEN YFEMQPLMGA EDFSFYQVSM PGHFSFVGMQ NEAHSPMASP
401: HSPYFEVNEE VLPYGAALHA SMATRYLLDL KTSSLSNSKD EL

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.