CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88581	Canola	endoplasmic reticulum	86.42	84.05
CDY32768	Canola	endoplasmic reticulum	83.14	79.95
CDY32874	Canola	endoplasmic reticulum	83.61	79.69
AT5G56660.1	Thale cress	endoplasmic reticulum	79.39	77.22
AT5G56650.1	Thale cress	endoplasmic reticulum	78.92	76.94
CDY42210	Canola	mitochondrion	28.57	71.34
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	43.56	62.63
CDY69786	Canola	endoplasmic reticulum, extracellular	52.46	62.57
CDX87841	Canola	endoplasmic reticulum	61.83	59.46
CDY22869	Canola	endoplasmic reticulum	61.36	59.28
CDY43926	Canola	endoplasmic reticulum	61.59	59.23
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	58.31	56.85
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	54.8	54.04
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	55.04	54.02
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	55.5	53.74
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	55.5	53.74
Os01t0560000-01	Rice	plasma membrane	55.5	53.62
Zm00001d044225_P001	Maize	extracellular	56.21	53.33
OQU87019	Sorghum	endoplasmic reticulum	55.97	48.58
CDY12538	Canola	cytosol, endoplasmic reticulum	32.08	46.76
CDY28718	Canola	endoplasmic reticulum	45.43	44.5
CDY51525	Canola	endoplasmic reticulum	45.2	43.86
CDY14979	Canola	endoplasmic reticulum	46.84	43.38
CDY14333	Canola	endoplasmic reticulum	42.39	42.39
CDY60579	Canola	endoplasmic reticulum	41.69	41.49
CDX90411	Canola	cytoskeleton, cytosol, vacuole	5.15	30.99
CDY09109	Canola	cytoskeleton, cytosol, vacuole	5.15	30.99

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:A0A078FBY2	UniProt:A0A078FBY2	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlants:CDY11910	ProteinID:CDY11910	ProteinID:CDY11910.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00060750001	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF119	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0004EB6921	SEG:seg	:

Description

BnaC03g13360DBnaC03g13360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBY2]

Coordinates

chrLK032015:-:407050..409499

Molecular Weight (calculated)

46707.4 Da

IEP (calculated)

6.701

GRAVY (calculated)

-0.044

Length

427 amino acids

Sequence
(BLAST)

001: MAINNFLLFS LTFQLLLLLR GSSESSRITG DVSRTPKKFL ELAKSQDLFD WMVRIRRKIH ENPKLGFEEY ETSKLIRSEL DLMGVKYRYP VAITGVVGYI
101: GTGEPPFVAL RADMDALPMQ EDVEWAHKSK VPGKMHACGH DGHVAMLLGA AKMLQEHRQD LQGTVVLIFQ PAEEVFAGAK KMIEEGALKH VEAIFGIHLT
201: NRVPFGKTAS LAGSLLAGSG FFEAVVTGKG GHAAIPQHTI DPVIAASSVV LSLQHLVSRE TDPLDSKVVT VSMVHGGNAF NVIPDSITLG GTLRAFTGFS
301: QLQQRVKEVI TKQATVHRCN APVNLTPHGK EQVPPLVNDM DLYKQFKNMV GDLLGEESFV EASPVMGGED FSYFAEAIPG HFSFLGMQDE TKSYASTHSS
401: LYRVNEDALP YGAAMHASMA VQYLQGH

Best Arabidopsis Sequence Match ( AT5G56660.1 )
(BLAST)

001: MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG
101: TGEPPFVALR ADMDALPIQE GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK MREEGALKNV EAIFGIHLSA
201: RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ
301: LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL
401: YRINEDVLPY GAAIHASMAV QYLKEKASKG SVSGFHEEL

Arabidopsis Description

ILL2At5g56660 [Source:UniProtKB/TrEMBL;Acc:Q5HZ30]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.