CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, endoplasmic reticulum

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 2
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14979	Canola	endoplasmic reticulum	98.29	62.47
PGSC0003DMT400076719	Potato	cytosol	70.65	59.14
AT1G44350.1	Thale cress	endoplasmic reticulum	87.71	55.39
CDX90411	Canola	cytoskeleton, cytosol, vacuole	11.95	49.3
CDY09109	Canola	cytoskeleton, cytosol, vacuole	11.95	49.3
KRH64641	Soybean	endoplasmic reticulum	71.33	44.85
KRH53263	Soybean	endoplasmic reticulum	70.65	44.52
VIT_18s0001g02570.t01	Wine grape	endoplasmic reticulum	72.7	43.74
GSMUA_Achr3P07240_001	Banana	endoplasmic reticulum	69.97	43.71
GSMUA_Achr8P23150_001	Banana	endoplasmic reticulum	67.24	43.3
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	69.28	41.86
CDY42210	Canola	mitochondrion	20.14	34.5
CDY22869	Canola	endoplasmic reticulum	50.51	33.48
CDX87841	Canola	endoplasmic reticulum	50.51	33.33
CDY43926	Canola	endoplasmic reticulum	50.17	33.11
CDY28718	Canola	endoplasmic reticulum	48.46	32.57
CDY32768	Canola	endoplasmic reticulum	48.81	32.21
CDY69786	Canola	endoplasmic reticulum, extracellular	39.25	32.12
CDX88581	Canola	endoplasmic reticulum	48.12	32.12
CDY11910	Canola	endoplasmic reticulum	46.76	32.08
CDY51525	Canola	endoplasmic reticulum	48.12	32.05
CDY14333	Canola	endoplasmic reticulum	45.73	31.38
CDY32874	Canola	endoplasmic reticulum	47.78	31.25
CDY60579	Canola	endoplasmic reticulum	45.39	31.0

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.40.630.10	GO:A0A078FKA0	UniProt:A0A078FKA0	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom
EnsemblPlants:CDY12538	ProteinID:CDY12538	ProteinID:CDY12538.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00061907001	PFAM:PF01546	PANTHER:PTHR11014	PANTHER:PTHR11014:SF62
InterPro:Peptidase_M20	SUPFAM:SSF53187	SUPFAM:SSF55031	TIGRFAMs:TIGR01891	UniParc:UPI0004EEFFAD	SEG:seg

Description

BnaC06g00640DBnaC06g00640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKA0]

Coordinates

chrLK032024:-:135657..138731

Molecular Weight (calculated)

31384.4 Da

IEP (calculated)

5.126

GRAVY (calculated)

0.144

Length

293 amino acids

Sequence
(BLAST)

001: MHACGHDAHV TMLLGAAQIL KSREHLLKGT VILLFQPAEE AGNGAKKMIE DGALDDVEAI FAVHVSHEHP TGVIGSRSGP LLAGCGFFRA IITSEKSGSS
101: ADLIIAASSA VISLQGIVSR EASPLDAQVV SVTSFDGGHS LDAVPDTVVL GGTFRAFSNS SFYYLMKRIR EVLMEQVGVF GCKATLNFFE EQNAIYPPTT
201: NDDGMYTHLK KVTVDLLGDN NFAVAPQVMG AEDFAFYSEV IPAAFYFIGI RNEELGSVHI GHSPHFMIDE DSLPVGAAVH AAVAERYLND KRS

Best Arabidopsis Sequence Match ( AT1G44350.1 )
(BLAST)

001: MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP
101: ELAFEEYETS RLIRSELDRM GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH VTMLLGAAHI LKAREHLLKG
201: TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV
301: VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM
401: GAEDFAFYSE IIPAAFYFIG IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS

Arabidopsis Description

ILL6IAA-amino acid hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WNN8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.