Factsheet for VIT_18s0001g02570.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400076719	Potato	cytosol	59.14	82.29
KRH53263	Soybean	endoplasmic reticulum	70.43	73.76
KRH64641	Soybean	endoplasmic reticulum	70.23	73.39
Bra036946.1-P	Field mustard	plasma membrane	44.15	73.38
CDY12538	Canola	cytosol, endoplasmic reticulum	43.74	72.7
Solyc10g079640.1.1	Tomato	endoplasmic reticulum	69.61	69.9
GSMUA_Achr3P07240_001	Banana	endoplasmic reticulum	65.3	67.8
GSMUA_Achr8P23150_001	Banana	endoplasmic reticulum	62.83	67.25
CDY14979	Canola	endoplasmic reticulum	61.6	65.08
AT1G44350.1	Thale cress	endoplasmic reticulum	61.19	64.22
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	48.67	53.99
VIT_16s0098g00780.t01	Wine grape	mitochondrion	43.33	53.55
VIT_16s0098g00770.t01	Wine grape	cytosol	34.7	52.65
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	47.23	52.15
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	44.76	50.82
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	44.15	49.09
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	43.94	48.64
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	48.67	25.9

Protein Annotations

EntrezGene:100264396	wikigene:100264396	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	ProteinID:CBI19006	ProteinID:CBI19006.3	UniProt:E0CR52	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EntrezGene:LOC100264396	wikigene:LOC100264396
MEROPS:M20.A05	PFAM:PF01546	PFAM:PF07687	PANTHER:PTHR11014	PANTHER:PTHR11014:SF62	InterPro:Peptidase_M20
InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	TMHMM:TMhelix
UniParc:UPI00015C7A07	ArrayExpress:VIT_18s0001g02570	EnsemblPlantsGene:VIT_18s0001g02570	EnsemblPlants:VIT_18s0001g02570.t01	unigene:Vvi.19544	RefSeq:XP_002284503
RefSeq:XP_002284503.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:-:2822064..2827157

Molecular Weight (calculated)

53604.2 Da

IEP (calculated)

6.233

GRAVY (calculated)

-0.037

Length

487 amino acids

Sequence
(BLAST)

001: MIHLQKLLII FLILIFAVSV NCIDRITAPT ASSDHDYSYF EPPCCNSKAP TTQKNVSSAL DRSTTPAVAD CTIWIKEPAV SDCAIWRKEC SEEILRIAKR
101: PETVEWLKGI RRRIHENPEL AFEEFNTSRL IRRELDQMDI SYRFPLAKTG IRATIGTGGP PFVAVRADMD ALPIQEAVEW EHKSKVAGKM HACGHDAHVA
201: MLLGAARILK AREHHLKGTV VLVFQPAEEA GNGAKRMIGD GALENVEAIF AVHVSHEHPT SIIGSRPGPL LAGCGFFRAV ITGKEGDAGN PHRSVDPVLA
301: ASAAVISLQG IVSREANPLD SQVVSVTSLN GGDSLDMIAD TVVLGGTFRA FSNTSFYQLL QRIEEVIVEQ ARVFRCSATV DFFEKEYTIY PPTVNDEGMY
401: EHVRKVAIDL FGPTNFRVVP PMMGAEDFSF YSEVVPAAFF YIGVRNETLG SIHTGHSPYF MIDEDALPMG AAAHAAIAER YLNEHRR

Best Arabidopsis Sequence Match ( AT1G44350.1 )
(BLAST)

001: MDNLRKLNLL SVSLTIIFVS LTIATNLPFF EVKYPNNNPF GMLLRPTPIK NQSLGLPAHV GSDECRVWTK ACSDEILRLT YQPDNVAWLK RVRRTIHENP
101: ELAFEEYETS RLIRSELDRM GIMYRYPLAK TGIRAWIGSG GPPFVAVRAD MDALPIQEAV EWEHISKVAG KMHACGHDAH VTMLLGAAHI LKAREHLLKG
201: TVVLLFQPAE EAGNGAKNMI EDGALDDVEA IFAVHVSHIH PTGVIGSRSG PLLAGCGIFR AVITSEDSRG AANLLLAASS AVISLQGIVS REASPLDSQV
301: VSVTSFDGGH SLDVAPDTVV LGGTFRAFSN SSFYYLKKRI QEVLMDQVGV FGCQATVNFF EKQNAIYPPT TNNDATYNHL KKVTIDLLGD SHFTLAPQMM
401: GAEDFAFYSE IIPAAFYFIG IRNEELGSVH IAHSPHFMID EDSLPVGAAV HAAVAERYLN DKHS

Arabidopsis Description

ILL6IAA-amino acid hydrolase [Source:UniProtKB/TrEMBL;Acc:Q0WNN8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.