Factsheet for VIT_16s0098g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0098g00770.t01	Wine grape	cytosol	68.53	84.11
PGSC0003DMT400069509	Potato	endoplasmic reticulum	70.05	64.19
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	69.8	63.95
Bra010868.1-P	Field mustard	cytoskeleton, cytosol, vacuole	11.17	61.97
CDX90411	Canola	cytoskeleton, cytosol, vacuole	11.17	61.97
CDY09109	Canola	cytoskeleton, cytosol, vacuole	11.17	61.97
GSMUA_Achr5P10200_001	Banana	cytosol	49.24	60.81
Bra020158.1-P	Field mustard	cytosol, extracellular, nucleus	11.42	56.25
OQU81996	Sorghum	endoplasmic reticulum, extracellular	59.64	56.22
Os04t0521800-01	Rice	endoplasmic reticulum	59.9	55.4
AT5G54140.1	Thale cress	endoplasmic reticulum	60.15	55.37
TraesCS2D01G375700.1	Wheat	endoplasmic reticulum	57.87	54.81
TraesCS2A01G379500.1	Wheat	endoplasmic reticulum	57.87	54.81
CDY14333	Canola	endoplasmic reticulum	58.63	54.1
KRH64274	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	64.21	53.94
TraesCS2B01G396400.1	Wheat	endoplasmic reticulum	57.61	53.92
Bra003012.1-P	Field mustard	endoplasmic reticulum	58.38	53.74
CDY60579	Canola	endoplasmic reticulum	58.38	53.61
Zm00001d003002_P001	Maize	extracellular	58.63	53.6
HORVU2Hr1G089950.3	Barley	endoplasmic reticulum	57.61	52.79
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	58.12	52.28
TraesCS2A01G379400.1	Wheat	endoplasmic reticulum	57.87	52.17
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	58.12	52.16
HORVU2Hr1G090000.1	Barley	endoplasmic reticulum, golgi, mitochondrion	57.87	50.78
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	51.78	47.55
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	52.54	47.26
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	52.54	47.05
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	48.73	43.54
VIT_18s0001g02570.t01	Wine grape	endoplasmic reticulum	53.55	43.33
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	48.22	43.28
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	48.73	20.98

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	ProteinID:CCB48102
ProteinID:CCB48102.1	UniProt:F6H788	EMBL:FN595247	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	MEROPS:M20.A06	PFAM:PF01546	PFAM:PF07687	PIRSF:PIRSF005962
PANTHER:PTHR11014	PANTHER:PTHR11014:SF140	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031
TIGRFAMs:TIGR01891	UniParc:UPI000210A9A5	ArrayExpress:VIT_16s0098g00780	EnsemblPlantsGene:VIT_16s0098g00780	EnsemblPlants:VIT_16s0098g00780.t01	SEG:seg

Description

No Description!

Coordinates

chr16:+:21120452..21126524

Molecular Weight (calculated)

43352.6 Da

IEP (calculated)

7.309

GRAVY (calculated)

-0.148

Length

394 amino acids

Sequence
(BLAST)

001: MLRLGRSWPS KRRVFGTPRE EPRKAEWLVS IRRKIHENPE LKFEEYNTSA LIRGELDKLG ISYTHPLAKT GIVAEIGTGS GPVVALRADM DALPLQELVE
101: WEHKSKIDGK MHGCGHDAHT TMLLGAAKLL NKRKHKLKGT VRFLFQPAEE GGLGALEMIK EGALGRIASR SGPLLAAVCT FEARIEGKGG DAAEPHTNVD
201: PILAASLSIL ALQQLISREL DLLDCQVLSV TSVKGGTTLN LTPSYVVLGG SLRSHTTEGL KQLQKRVKEV IEGQAAVHRC NAYFYRTEED YLLPAVVNDE
301: VMHQHVVRVG KLLLGPENTQ VANKVMASED FAFYQEVIPG VMFGIGVRNE QVGSVHPLHS SHFFLDEAVL PIRAALHTAI AEMYLDEHQN PILP

Best Arabidopsis Sequence Match ( AT5G54140.1 )
(BLAST)

001: MANSSIVALL LLFVIASSVN GGDQEYPNQY LTEALGDKEW LVSVRRQIHE NPELLFELHK TSALIRRELD ELGVSYSYPV AKTGIVAQIG SGYPPVVALR
101: ADMDALPLQE LVEWDHKSKI DGKMHACGHD SHTTMLLGAA KLLSKRKRML NGTVRLLFQP AEEGGAGAFH MIKEGALGDS EAIFGMHVHT GLPTGELATI
201: SGPALASTSI FSVRMSGKSP ASSETYSCVD PVLAASSTIL ALQLIISREV DPLLSHVLSV TFMKSGGSEF DVIPAYVEFG GTLRSLTTNG INWLIKRLKE
301: VVEGQAEVQR CKADIDMHED DHPMYPATVN DHKLHEFTEK VLKLLLGPEK VKPANKVMAG EDFAFYQQKI PGYYIGIGIR NEEIGSVRSV HSPYFFLDEN
401: VLPIGSATFA ALAEMYLQEH QNQTKSGD

Arabidopsis Description

ILL3IAA-amino acid hydrolase ILR1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:O81641]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.