Factsheet for VIT_16s0098g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0098g00780.t01	Wine grape	mitochondrion	84.11	68.53
Bra010868.1-P	Field mustard	cytoskeleton, cytosol, vacuole	14.33	64.79
CDX90411	Canola	cytoskeleton, cytosol, vacuole	14.33	64.79
CDY09109	Canola	cytoskeleton, cytosol, vacuole	14.33	64.79
GSMUA_Achr5P10200_001	Banana	cytosol	63.55	63.95
Bra020158.1-P	Field mustard	cytosol, extracellular, nucleus	14.64	58.75
PGSC0003DMT400069509	Potato	endoplasmic reticulum	75.08	56.05
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	74.14	55.35
Os04t0521800-01	Rice	endoplasmic reticulum	66.36	50.0
OQU81996	Sorghum	endoplasmic reticulum, extracellular	64.8	49.76
TraesCS2D01G375700.1	Wheat	endoplasmic reticulum	63.86	49.28
TraesCS2B01G396400.1	Wheat	endoplasmic reticulum	63.86	48.69
TraesCS2A01G379500.1	Wheat	endoplasmic reticulum	62.93	48.56
Zm00001d003002_P001	Maize	extracellular	64.17	47.8
HORVU2Hr1G089950.3	Barley	endoplasmic reticulum	63.24	47.21
TraesCS2A01G379400.1	Wheat	endoplasmic reticulum	64.17	47.14
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	64.17	47.03
AT5G54140.1	Thale cress	endoplasmic reticulum	62.62	46.96
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	64.17	46.92
KRH64274	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	67.29	46.06
HORVU2Hr1G090000.1	Barley	endoplasmic reticulum, golgi, mitochondrion	64.17	45.88
CDY14333	Canola	endoplasmic reticulum	60.75	45.67
Bra003012.1-P	Field mustard	endoplasmic reticulum	60.44	45.33
CDY60579	Canola	endoplasmic reticulum	60.44	45.22
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	52.65	39.39
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	53.27	39.04
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	52.34	38.18
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	50.78	36.96
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	49.84	36.45
VIT_18s0001g02570.t01	Wine grape	endoplasmic reticulum	52.65	34.7
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	51.71	18.14

Protein Annotations

EntrezGene:100246990	wikigene:100246990	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	ProteinID:CCB48103	ProteinID:CCB48103.1	UniProt:F6H789	EMBL:FN595247	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EntrezGene:LOC100246990	wikigene:LOC100246990
PFAM:PF01546	PFAM:PF07687	PANTHER:PTHR11014	PANTHER:PTHR11014:SF140	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer
SUPFAM:SSF53187	SUPFAM:SSF55031	TIGRFAMs:TIGR01891	UniParc:UPI000210A9A6	ArrayExpress:VIT_16s0098g00770	EnsemblPlantsGene:VIT_16s0098g00770
EnsemblPlants:VIT_16s0098g00770.t01	unigene:Vvi.22804	RefSeq:XP_002269226	RefSeq:XP_002269226.1	:	:

Description

No Description!

Coordinates

chr16:+:21116293..21120181

Molecular Weight (calculated)

34914.2 Da

IEP (calculated)

6.260

GRAVY (calculated)

-0.044

Length

321 amino acids

Sequence
(BLAST)

001: MDALPLQELV EWEHKSKIDG KMHGCGHDAH TTMLLGAAKL LSQRKHKLKG TVRLLFQPAE EGGLGAREMI KVGALGDAEV IFGMHIDHET PTGSIASRSG
101: PFLAAVCSFE ARIEGKGGDA AEPHTNADPI LAASFSILAL QQLISRELDP LDSQVLSVTT VKGGTTLNLT PSHVVLRGSL RSLTTEGLKQ LRKRVKEVIE
201: GQAAVHRCNA YFDRTEDYLL PAVVNDEVMH QHVMRVGKLV LGPENILIAN KVMASEDFAF YQEVIPGVMF SIGIRNELVG SVHSPHSPHF FLDEDVLPIG
301: AALHTALAEI YLDEHQNPTL P

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.