Factsheet for TraesCS2A01G379400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G396300.1	Wheat	endoplasmic reticulum	96.57	96.35
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	94.28	93.85
HORVU2Hr1G090000.1	Barley	endoplasmic reticulum, golgi, mitochondrion	92.45	89.98
TraesCS2A01G379500.1	Wheat	endoplasmic reticulum	85.58	89.9
Os04t0521800-01	Rice	endoplasmic reticulum	81.46	83.57
OQU81996	Sorghum	endoplasmic reticulum, extracellular	75.97	79.43
Zm00001d003002_P001	Maize	extracellular	75.06	76.1
GSMUA_Achr5P10200_001	Banana	cytosol	52.86	72.41
VIT_16s0098g00770.t01	Wine grape	cytosol	47.14	64.17
Bra010868.1-P	Field mustard	cytoskeleton, cytosol, vacuole	10.07	61.97
CDX90411	Canola	cytoskeleton, cytosol, vacuole	10.07	61.97
CDY09109	Canola	cytoskeleton, cytosol, vacuole	10.07	61.97
Solyc06g073060.2.1	Tomato	endoplasmic reticulum	58.81	59.77
PGSC0003DMT400069509	Potato	endoplasmic reticulum	58.35	59.3
VIT_16s0098g00780.t01	Wine grape	mitochondrion	52.17	57.87
AT5G54140.1	Thale cress	endoplasmic reticulum	55.61	56.78
Bra020158.1-P	Field mustard	cytosol, extracellular, nucleus	10.3	56.25
CDY14333	Canola	endoplasmic reticulum	54.92	56.21
TraesCS4A01G355300.1	Wheat	cytosol	37.07	55.86
Bra003012.1-P	Field mustard	endoplasmic reticulum	54.69	55.84
CDY60579	Canola	endoplasmic reticulum	54.0	55.01
KRH64274	Soybean	endoplasmic reticulum, golgi, mitochondrion, plastid	56.06	52.24
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	48.97	50.71
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	49.43	50.47
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	49.43	50.12
TraesCS4A01G355400.1	Wheat	cytosol	47.37	49.52
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	42.79	43.19
TraesCS7A01G435700.1	Wheat	endoplasmic reticulum	44.39	40.0

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF140	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	EnsemblPlantsGene:TraesCS2A01G379400	EnsemblPlants:TraesCS2A01G379400.1	TIGR:cd08017
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:622457333..622463532

Molecular Weight (calculated)

47340.2 Da

IEP (calculated)

6.578

GRAVY (calculated)

-0.026

Length

437 amino acids

Sequence
(BLAST)

001: MKACPTFHLT MATRLPCLFV LLLLLSTASA EYAQELLRRA EGEREWIIGV RRRIHAHPEL AFHEHRTSAL VREGLERLGV TARAVAGTGV VADVGSGMPP
101: IVALRADMDA LPIQELVEWE HKSRVDGVMH ACGHDVHTAM LLGAAKLLHE RKDQLKGTVR LLFQPAEEGG AGASHMIEEG VLDGVEAIFA MHIDYRMPTG
201: VIAAHAGPTQ AAVCFYVVKI EGKTGKAETP HLNVDPIVAA AFTILSLQQL TSREDDPLHS QVLSVTYIKG GNSVDATPPV VEFGGTLRSL TTEGLYRLQK
301: RLKEVVEGQA AVHRCTGVTE ILGAPSHPMY PAVVNDKRLH QHVENVGRSL LGPDKVKPGE KIMAGEDFAF YQQLVPGVMF GIGIRNENVG SVHSAHNPHF
401: FVDEDVLPIG AALHTATAEM YLSGRSTQNE DGSVHSL

Best Arabidopsis Sequence Match ( AT5G54140.1 )
(BLAST)

001: MANSSIVALL LLFVIASSVN GGDQEYPNQY LTEALGDKEW LVSVRRQIHE NPELLFELHK TSALIRRELD ELGVSYSYPV AKTGIVAQIG SGYPPVVALR
101: ADMDALPLQE LVEWDHKSKI DGKMHACGHD SHTTMLLGAA KLLSKRKRML NGTVRLLFQP AEEGGAGAFH MIKEGALGDS EAIFGMHVHT GLPTGELATI
201: SGPALASTSI FSVRMSGKSP ASSETYSCVD PVLAASSTIL ALQLIISREV DPLLSHVLSV TFMKSGGSEF DVIPAYVEFG GTLRSLTTNG INWLIKRLKE
301: VVEGQAEVQR CKADIDMHED DHPMYPATVN DHKLHEFTEK VLKLLLGPEK VKPANKVMAG EDFAFYQQKI PGYYIGIGIR NEEIGSVRSV HSPYFFLDEN
401: VLPIGSATFA ALAEMYLQEH QNQTKSGD

Arabidopsis Description

ILL3IAA-amino acid hydrolase ILR1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:O81641]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.