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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d003002_P001 Maize extracellular 90.91 88.17
Os04t0521800-01 Rice endoplasmic reticulum 81.58 80.05
TraesCS2A01G379500.1 Wheat endoplasmic reticulum 78.23 78.61
TraesCS2D01G375700.1 Wheat endoplasmic reticulum 77.99 78.37
TraesCS2B01G396400.1 Wheat endoplasmic reticulum 78.23 77.67
HORVU2Hr1G089950.3 Barley endoplasmic reticulum 78.47 76.28
TraesCS2A01G379400.1 Wheat endoplasmic reticulum 79.43 75.97
TraesCS2B01G396300.1 Wheat endoplasmic reticulum 79.43 75.8
TraesCS2D01G375600.1 Wheat endoplasmic reticulum, golgi, plastid 78.47 74.72
GSMUA_Achr5P10200_001 Banana cytosol 56.22 73.67
HORVU2Hr1G090000.1 Barley endoplasmic reticulum, golgi, mitochondrion 78.47 73.05
VIT_16s0098g00770.t01 Wine grape cytosol 49.76 64.8
Solyc06g073060.2.1 Tomato endoplasmic reticulum 62.68 60.93
PGSC0003DMT400069509 Potato endoplasmic reticulum 62.44 60.7
VIT_16s0098g00780.t01 Wine grape mitochondrion 56.22 59.64
CDX90411 Canola cytoskeleton, cytosol, vacuole 10.05 59.15
CDY09109 Canola cytoskeleton, cytosol, vacuole 10.05 59.15
Bra010868.1-P Field mustard cytoskeleton, cytosol, vacuole 10.05 59.15
CDY14333 Canola endoplasmic reticulum 59.33 58.08
AT5G54140.1 Thale cress endoplasmic reticulum 59.33 57.94
Bra003012.1-P Field mustard endoplasmic reticulum 59.09 57.71
CDY60579 Canola endoplasmic reticulum 58.61 57.11
EER93137 Sorghum cytosol 52.39 54.34
KRH64274 Soybean endoplasmic reticulum, golgi, mitochondrion, plastid 60.29 53.73
Bra020158.1-P Field mustard cytosol, extracellular, nucleus 10.05 52.5
EER93138 Sorghum cytosol 52.15 52.28
EER96151 Sorghum endoplasmic reticulum 55.5 52.02
EER96147 Sorghum mitochondrion 52.63 49.66
EER96149 Sorghum endoplasmic reticulum 52.39 48.78
EES03499 Sorghum endoplasmic reticulum 51.91 48.55
EES15570 Sorghum endoplasmic reticulum 50.48 47.1
OQU87019 Sorghum endoplasmic reticulum 48.56 41.26
EER90283 Sorghum endoplasmic reticulum 48.8 39.61
Protein Annotations
MapMan:19.4.5.6.6Gene3D:3.30.70.360Gene3D:3.40.630.10UniProt:A0A1Z5RF27InterPro:AmidohydrolaseInterPro:Bact_exopeptidase_dim_dom
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlants:OQU81996
ProteinID:OQU81996ProteinID:OQU81996.1PFAM:PF01546PIRSF:PIRSF005962PANTHER:PTHR11014PANTHER:PTHR11014:SF140
InterPro:Peptidase_M20EnsemblPlantsGene:SORBI_3006G150600SUPFAM:SSF53187SUPFAM:SSF55031SignalP:SignalP-noTMTIGRFAMs:TIGR01891
UniParc:UPI000B8BB1F8SEG:seg::::
Description
hypothetical protein
Coordinates
chr6:+:51159287..51162675
Molecular Weight (calculated)
45280.5 Da
IEP (calculated)
5.937
GRAVY (calculated)
-0.002
Length
418 amino acids
Sequence
(BLAST)
001: MAIPLLLLLL VLSSASADEY GDELLQRAWG EREWMVSVRR RIHAHPELAF REHRTAALVR EELERLGLST RAVAGTGVVA DVGSGALPFV ALRADMDALP
101: LQELVEWEHK SKVDGVMHAC GHDVHTAMLL GAAKLLSQRK DQLKGTVRLL FQPAEEGGAG ASHMIREGVL DGVKAIFAMH VDYQIPTGVI AAHPGPTQAA
201: VCFFAAKIEG NTGPSETPHL NVDPIVAASL AILSLQQLIS REDDPLHSQV VSVTYVKAGK ALDATPDVVE FGGTLRSLTT EGLYRLQRRV KEVVEGQAAV
301: HRCKGAVDMK AEDYPMYPAV VNDERLHRHV EDVGRGLLGP GNVRPGEKIM AGEDFAFYQQ LVPGVMFGIG IRNEKAGSVY SVHNPYFFVD EDVIPVGAAL
401: HAAIAELYFT EGSSLNKD
Best Arabidopsis Sequence Match ( AT5G54140.1 )
(BLAST)
001: MANSSIVALL LLFVIASSVN GGDQEYPNQY LTEALGDKEW LVSVRRQIHE NPELLFELHK TSALIRRELD ELGVSYSYPV AKTGIVAQIG SGYPPVVALR
101: ADMDALPLQE LVEWDHKSKI DGKMHACGHD SHTTMLLGAA KLLSKRKRML NGTVRLLFQP AEEGGAGAFH MIKEGALGDS EAIFGMHVHT GLPTGELATI
201: SGPALASTSI FSVRMSGKSP ASSETYSCVD PVLAASSTIL ALQLIISREV DPLLSHVLSV TFMKSGGSEF DVIPAYVEFG GTLRSLTTNG INWLIKRLKE
301: VVEGQAEVQR CKADIDMHED DHPMYPATVN DHKLHEFTEK VLKLLLGPEK VKPANKVMAG EDFAFYQQKI PGYYIGIGIR NEEIGSVRSV HSPYFFLDEN
401: VLPIGSATFA ALAEMYLQEH QNQTKSGD
Arabidopsis Description
ILL3IAA-amino acid hydrolase ILR1-like 3 [Source:UniProtKB/Swiss-Prot;Acc:O81641]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.