Factsheet for VIT_08s0007g02760.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 4
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	71.69	71.36
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	65.3	66.67
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	61.87	62.88
CDY28718	Canola	endoplasmic reticulum	62.1	62.39
Bra040608.1-P	Field mustard	endoplasmic reticulum	61.87	62.01
CDY51525	Canola	endoplasmic reticulum	61.87	61.59
AT3G02875.1	Thale cress	endoplasmic reticulum	61.19	60.63
EER93137	Sorghum	cytosol	54.79	59.55
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	51.37	59.52
Zm00001d012887_P001	Maize	cytosol	55.25	59.31
TraesCS4A01G355300.1	Wheat	cytosol	39.04	58.97
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	51.83	58.96
TraesCS5B01G517000.1	Wheat	cytosol	54.79	58.39
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	56.39	58.39
TraesCS5D01G517000.1	Wheat	cytosol	53.88	58.27
HORVU5Hr1G027710.1	Barley	cytosol	42.92	58.2
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	56.62	58.08
EER93138	Sorghum	cytosol	55.25	58.03
TraesCS5D01G113000.2	Wheat	cytosol	42.69	57.89
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	55.71	57.82
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	55.94	57.38
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	55.25	57.35
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	55.25	56.94
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	56.39	56.91
Os03t0836800-01	Rice	cytosol, plastid	35.84	56.88
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	55.48	56.78
Zm00001d015731_P001	Maize	endoplasmic reticulum	55.71	56.22
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	54.57	55.45
Os07t0249800-01	Rice	cytosol	35.62	55.12
EER96147	Sorghum	mitochondrion	55.71	55.08
TraesCS4A01G355400.1	Wheat	cytosol	52.28	54.78
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	53.65	54.52
EER96151	Sorghum	endoplasmic reticulum	55.48	54.48
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	54.57	54.07
VIT_16s0098g00770.t01	Wine grape	cytosol	39.04	53.27
Os07t0249700-01	Rice	plasma membrane	54.57	52.64
VIT_16s0098g00780.t01	Wine grape	mitochondrion	47.26	52.54
Os07t0249900-01	Rice	cytosol, plasma membrane	18.95	52.2
EES15570	Sorghum	endoplasmic reticulum	53.2	52.01
Zm00001d019306_P001	Maize	plastid	52.51	51.92
EER96149	Sorghum	endoplasmic reticulum	53.2	51.89
TraesCS5B01G517200.1	Wheat	plastid	52.51	51.22
VIT_09s0002g02630.t01	Wine grape	endoplasmic reticulum	50.68	50.34
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	52.97	50.33
VIT_11s0016g02700.t01	Wine grape	endoplasmic reticulum	49.54	49.43
GSMUA_Achr8P32890_001	Banana	cytosol	59.82	45.17
VIT_18s0001g02570.t01	Wine grape	endoplasmic reticulum	49.09	44.15
VIT_01s0026g00820.t01	Wine grape	endoplasmic reticulum	49.09	23.5

Protein Annotations

EntrezGene:100257930	wikigene:100257930	MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	ProteinID:CCB55463	ProteinID:CCB55463.1	UniProt:F6HKP1	EMBL:FN595991	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EntrezGene:LOC100257930	wikigene:LOC100257930
PFAM:PF01546	PFAM:PF07687	PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF108	InterPro:Peptidase_M20
InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGR:TC62316	TIGRFAMs:TIGR01891
UniParc:UPI0001983F18	ArrayExpress:VIT_08s0007g02760	EnsemblPlantsGene:VIT_08s0007g02760	EnsemblPlants:VIT_08s0007g02760.t01	RefSeq:XP_002281507	RefSeq:XP_002281507.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:16821797..16823983

Molecular Weight (calculated)

47821.8 Da

IEP (calculated)

5.318

GRAVY (calculated)

-0.009

Length

438 amino acids

Sequence
(BLAST)

001: MELMWWWLML LWPLLCRNAR AVGSGSGLEM EGLSRELLES AREREFFEWM RGVRRKIHQY PELGFEEHKT SELIRAELNS LGIGYKWPVA KTGVVASIGS
101: GDQPTFALRA DMDALPLQEL VEWEYKSKIE GKMHACGHDS HVAMLLGAAK LLQAKRGMLK GTVKLVFQPG EEGYAGAYHM LKEGALEDVK GMLGLHVIPT
201: VPTGGIASRA GPLLAGVGLF SATIQGKGGH GASPHTAKDP VLAASFAILA LQQIVSRETD PLEARVVTVG LVDGGEAGNV IPESVKIGGT FRSLTSQGLL
301: YLQERIKEVI ETQAAVHGCD AAVDFMEERG MPHPVMINDE TLYEHAKKVG EILVGEPNVE LLPITMGAED FSFYTKRFPA AMFTVGIKNE TLKSDYPLHS
401: PYFFIDEDAF PVGAAFYAAV AISYLDDHAV ESETHSIL

Best Arabidopsis Sequence Match ( AT3G02875.1 )
(BLAST)

001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL

Arabidopsis Description

ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.