Factsheet for TraesCS5D01G113000.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G027710.1	Barley	cytosol	94.12	94.12
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	96.59	72.39
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	96.28	72.16
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	78.64	57.47
Os07t0249700-01	Rice	plasma membrane	78.95	56.17
EER96151	Sorghum	endoplasmic reticulum	76.47	55.38
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	71.21	53.86
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	70.28	53.41
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	71.21	53.0
TraesCS5D01G517000.1	Wheat	cytosol	66.25	52.84
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	60.68	51.85
PGSC0003DMT400010807	Potato	endoplasmic reticulum, extracellular	38.7	50.81
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	64.71	48.49
VIT_08s0007g02740.t01	Wine grape	endoplasmic reticulum	60.37	45.45
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	59.44	43.64
PGSC0003DMT400079045	Potato	endoplasmic reticulum	58.82	43.38
Solyc06g054410.2.1	Tomato	endoplasmic reticulum	57.89	43.09
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	57.89	42.69
CDY28718	Canola	endoplasmic reticulum	55.73	41.28
Bra040608.1-P	Field mustard	endoplasmic reticulum	55.73	41.19
CDY51525	Canola	endoplasmic reticulum	55.73	40.91
AT3G02875.1	Thale cress	endoplasmic reticulum	55.73	40.72
TraesCS2D01G375700.1	Wheat	endoplasmic reticulum	51.08	39.66
TraesCS2D01G375600.1	Wheat	endoplasmic reticulum, golgi, plastid	52.01	38.27
TraesCS3D01G252900.1	Wheat	endoplasmic reticulum	49.85	37.18
PGSC0003DMT400081932	Potato	endoplasmic reticulum	32.51	36.84
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	48.92	35.83
GSMUA_Achr8P32890_001	Banana	cytosol	64.09	35.69
PGSC0003DMT400081926	Potato	endoplasmic reticulum	23.53	31.28
TraesCS7D01G426400.1	Wheat	plastid	45.2	30.87

Protein Annotations

EnsemblPlants:TraesCS5D01G113000.2	EnsemblPlantsGene:TraesCS5D01G113000	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom	InterPro:Peptidase_M20
InterPro:Peptidase_M20_dimer	PANTHER:PTHR11014	PANTHER:PTHR11014:SF113	PFAM:PF01546	PFAM:PF07687	SUPFAM:SSF53187
SUPFAM:SSF55031	TIGRFAMs:TIGR01891	MapMan:19.4.5.6.6	:	:	:

Description

No Description!

Coordinates

chr5D:-:129854347..129861324

Molecular Weight (calculated)

34683.7 Da

IEP (calculated)

5.676

GRAVY (calculated)

0.115

Length

323 amino acids

Sequence
(BLAST)

001: MDALPLQELV DWEYKSQESG KMHACGHDAH TSMLLGAAKL LHSWKDYIKG TVKLVFQPAE EGYAGAYHVL EEGILDDVSA IFGLHVDPSL PVGTVVTRPG
101: PFMAASGRFL ITVTGKGGHA AMPHSAVDPI VMASSAIISL QQIVAREIDP LEAAVVSVTF MKGGDAYNVI PESACFGGTF RSLTTEGLSY LKKRIKEIVE
201: AHAVVSRCTA TVDFMDEELR PYPATVNDEG MYDHARSVAA AMLGEGHVKI GGPIMAAEDF SFYTQRFPGA FFMLGTRDEA MATAVHPLHS PNFVIDEGVL
301: PVGAAFHAAV AMEYLNKRGT VAK

Best Arabidopsis Sequence Match ( AT1G51760.1 )
(BLAST)

001: MSFFKWVSFV LILHLLNPTL ISCSSNGLSQ IPSKFLTLAK RNDFFDWMVG IRRRIHENPE LGYEEVETSK LVRAELEKMG VSYKYPVAVT GVVGYVGTGH
101: APFVALRADM DALAMQEMVE WEHKSKVPGK MHACGHDAHT TMLLGAAKLL KEHEEELQGT VVLVFQPAEE GGGGAKKIVE AGVLENVSAI FGLHVTNQLA
201: LGQVSSREGP MLAGSGFFKA KISGKGGHAA LPQHTIDPIL AASNVIVSLQ HLVSREADPL DSQVVTVAKF EGGGAFNVIP DSVTIGGTFR AFSTKSFMQL
301: KKRIEQVITR QASVNMCNAT VDFIEEEKPF FPPTVNDKAL HQFFKNVSGD MLGIENYVEM QPLMGSEDFS FYQQAIPGHF SFVGMQNKAR SPMASPHSPY
401: FEVNEELLPY GASLHASMAT RYLLELKAST LNKSNKKDEL

Arabidopsis Description

ILL4JR3 [Source:UniProtKB/TrEMBL;Acc:A0A178W8I8]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.