CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 7
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51525	Canola	endoplasmic reticulum	98.62	97.73
AT3G02875.1	Thale cress	endoplasmic reticulum	89.22	88.01
VIT_08s0007g02760.t01	Wine grape	endoplasmic reticulum	62.39	62.1
VIT_08s0007g02770.t01	Wine grape	endoplasmic reticulum	60.32	59.77
EER93137	Sorghum	cytosol	52.75	57.07
TraesCS4A01G355300.1	Wheat	cytosol	37.39	56.21
TraesCS2D01G074700.1	Wheat	endoplasmic reticulum	48.62	56.08
TraesCS5D01G113000.2	Wheat	cytosol	41.28	55.73
GSMUA_Achr6P19420_001	Banana	endoplasmic reticulum	55.05	55.68
Zm00001d012887_P001	Maize	cytosol	52.06	55.64
TraesCS2D01G074800.1	Wheat	endoplasmic reticulum	54.13	55.27
EER93138	Sorghum	cytosol	52.75	55.16
TraesCS2B01G091000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	48.62	55.06
TraesCS2B01G091200.1	Wheat	endoplasmic reticulum	53.67	54.8
HORVU5Hr1G027710.1	Barley	cytosol	40.14	54.18
TraesCS5D01G517000.1	Wheat	cytosol	50.23	54.07
TraesCS5A01G180200.1	Wheat	endoplasmic reticulum	52.06	53.79
TraesCS5B01G178100.1	Wheat	endoplasmic reticulum	52.06	53.79
TraesCS5B01G105600.2	Wheat	endoplasmic reticulum	52.98	53.6
TraesCS2A01G076100.1	Wheat	endoplasmic reticulum	52.29	53.27
TraesCS2D01G074400.1	Wheat	endoplasmic reticulum	52.98	53.23
HORVU5Hr1G055060.6	Barley	endoplasmic reticulum	51.61	53.19
TraesCS5D01G184700.1	Wheat	endoplasmic reticulum	51.83	53.18
TraesCS5B01G517000.1	Wheat	cytosol	50.0	53.04
EER96147	Sorghum	mitochondrion	53.44	52.6
TraesCS5A01G100500.2	Wheat	endoplasmic reticulum	51.83	52.44
Zm00001d019311_P001	Maize	endoplasmic reticulum, extracellular, plastid	52.98	52.26
TraesCS4A01G355400.1	Wheat	cytosol	49.31	51.44
EER96151	Sorghum	endoplasmic reticulum	52.52	51.35
Os07t0249800-01	Rice	cytosol	33.26	51.24
Zm00001d019306_P001	Maize	plastid	50.92	50.11
Os07t0249700-01	Rice	plasma membrane	51.61	49.56
Os03t0836800-01	Rice	cytosol, plastid	30.96	48.91
CDY12538	Canola	cytosol, endoplasmic reticulum	32.57	48.46
Zm00001d015731_P001	Maize	endoplasmic reticulum	48.17	48.39
EER96149	Sorghum	endoplasmic reticulum	49.77	48.33
TraesCS5B01G517200.1	Wheat	plastid	49.08	47.66
EES15570	Sorghum	endoplasmic reticulum	48.39	47.1
HORVU5Hr1G118040.2	Barley	mitochondrion, plastid	49.31	46.64
CDY69786	Canola	endoplasmic reticulum, extracellular	38.07	46.37
Os07t0249900-01	Rice	cytosol, plasma membrane	16.74	45.91
CDX88581	Canola	endoplasmic reticulum	45.87	45.56
CDY22869	Canola	endoplasmic reticulum	46.1	45.48
CDY11910	Canola	endoplasmic reticulum	44.5	45.43
CDY32768	Canola	endoplasmic reticulum	45.64	44.82
CDX87841	Canola	endoplasmic reticulum	45.41	44.59
CDY32874	Canola	endoplasmic reticulum	45.64	44.42
CDY43926	Canola	endoplasmic reticulum	45.18	44.37
CDY14979	Canola	endoplasmic reticulum	46.33	43.82
CDY60579	Canola	endoplasmic reticulum	42.89	43.59
CDY14333	Canola	endoplasmic reticulum	42.2	43.09
CDY09109	Canola	cytoskeleton, cytosol, vacuole	6.65	40.85
CDX90411	Canola	cytoskeleton, cytosol, vacuole	6.65	40.85
GSMUA_Achr8P32890_001	Banana	cytosol	54.13	40.69
CDY42210	Canola	mitochondrion	11.93	30.41

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:A0A078GVM9	UniProt:A0A078GVM9	InterPro:Amidohydrolase
InterPro:Bact_exopeptidase_dim_dom	EnsemblPlants:CDY28718	ProteinID:CDY28718	ProteinID:CDY28718.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00041355001	PFAM:PF01546	PFAM:PF07687
PIRSF:PIRSF005962	PANTHER:PTHR11014	PANTHER:PTHR11014:SF108	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187
SUPFAM:SSF55031	SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0004EAC013	SEG:seg	:

Description

BnaCnng06040DBnaCnng06040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVM9]

Coordinates

chrLK032225:+:342033..344469

Molecular Weight (calculated)

47499.1 Da

IEP (calculated)

6.268

GRAVY (calculated)

-0.072

Length

436 amino acids

Sequence
(BLAST)

001: MNFSGVFFLF FFFLLSPALL RYGSGSGLES LSRGMLDSAK EPEFFEWMRG IRRRIHENPE TGFQEFKTSQ LIRDELDLLG VKYKWPVAKT GVVAWIGSGS
101: KPVFGLRADM DALPLQELVE WESKSKVDGK MHACGHDTHV AMLLGAAKLL QSRKHLIKGT VKLVFQPGEE GYGGAIEMLK DDILDDLDGI LSVHVFPTIP
201: SGGIGSRPGT VLAGAGVFTV TVHGQGSHAA TPHLSKDPVL AASSAVVALQ QIVSREMDPL EAGVVTVGYI QGGHTQNVIP QSAKFGGTFR SLSNDGLLFI
301: QRRIKEISEA QAAVYQCKAE VDFGEKEPSL HPVMKNDEGL YEHGKEVAEA MIGKNNFHDF PVTMGAEDFS FFTQRTKAAI FVLGIKNETL GAGKPLHSPY
401: FFVDEEALPL GAALHAAMAV TYLDKHGNDH EVKTEL

Best Arabidopsis Sequence Match ( AT3G02875.1 )
(BLAST)

001: MDFSGSFFVI FVTFFFLPPL SSAGSYDSGS GLESLARGML HSAKDPEFFE WMRGIRRKIH ENPETGFQEF KTSQLVRDEL DSLGVKYKYP VAKTGVVAWI
101: GSCSKPVFGL RADMDALPLQ ELVEWESKSK VDGKMHACGH DTHVAMLLGA AKLLQTTKHL IKGTVKLVFQ PGEEGYAGAY EMLKDEILDD LDGILSVHVF
201: PSIPSGGIGS RPGTVLAGAG LFTVTVHGQG SHAATPHFSK DPVLAASSAV VALQQIVSRE LDPLEAGVVT VGYIEGGHAQ NVIPQSAKFG GTFRSLSNDG
301: LLFIQRRIKE ISEAQASVYR CKAEVNFEEK KPSLHPVMNN DEGLYEHGKK VAEAMIGKNN FHDFPVTMGG EDFSFFTQKT KAAIFVLGVK NETLGAGKPL
401: HSPYFFVDEE ALPVGAALHA AMAVSYLDEH GHSHEEEVKS EL

Arabidopsis Description

ILR1IAA-amino acid hydrolase ILR1 [Source:UniProtKB/Swiss-Prot;Acc:P54968]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.