CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 8
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006863.1-P	Field mustard	endoplasmic reticulum	99.09	99.09
CDY11910	Canola	endoplasmic reticulum	84.05	86.42
CDY32768	Canola	endoplasmic reticulum	81.55	80.63
AT5G56660.1	Thale cress	endoplasmic reticulum	78.36	78.36
CDY32874	Canola	endoplasmic reticulum	79.95	78.35
AT5G56650.1	Thale cress	endoplasmic reticulum	78.13	78.31
CDY42210	Canola	mitochondrion	28.7	73.68
GSMUA_Achr7P24240_001	Banana	endoplasmic reticulum	44.65	65.99
CDY69786	Canola	endoplasmic reticulum, extracellular	53.08	65.08
CDX87841	Canola	endoplasmic reticulum	63.78	63.06
CDY43926	Canola	endoplasmic reticulum	63.78	63.06
CDY22869	Canola	endoplasmic reticulum	63.33	62.9
GSMUA_Achr4P15750_001	Banana	endoplasmic reticulum	59.91	60.05
TraesCS3A01G204400.1	Wheat	endoplasmic reticulum	56.72	57.51
TraesCS3B01G232800.1	Wheat	endoplasmic reticulum	56.95	57.47
TraesCS3D01G207700.2	Wheat	endoplasmic reticulum	57.4	57.14
HORVU3Hr1G048560.1	Barley	endoplasmic reticulum	56.95	56.69
Os01t0560000-01	Rice	plasma membrane	56.95	56.56
Zm00001d044225_P001	Maize	extracellular	56.95	55.56
OQU87019	Sorghum	endoplasmic reticulum	57.86	51.63
CDY12538	Canola	cytosol, endoplasmic reticulum	32.12	48.12
CDY28718	Canola	endoplasmic reticulum	45.56	45.87
CDY51525	Canola	endoplasmic reticulum	45.33	45.23
CDY14979	Canola	endoplasmic reticulum	45.79	43.6
CDY14333	Canola	endoplasmic reticulum	39.64	40.75
CDY60579	Canola	endoplasmic reticulum	39.18	40.09
CDX90411	Canola	cytoskeleton, cytosol, vacuole	4.78	29.58
CDY09109	Canola	cytoskeleton, cytosol, vacuole	4.78	29.58

Protein Annotations

MapMan:19.4.5.6.6	Gene3D:3.30.70.360	Gene3D:3.40.630.10	GO:A0A078DH61	InterPro:Amidohydrolase	InterPro:Bact_exopeptidase_dim_dom
EnsemblPlants:CDX88581	ProteinID:CDX88581	ProteinID:CDX88581.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00148614001	PFAM:PF01546	PFAM:PF07687	PIRSF:PIRSF005962
PANTHER:PTHR11014	PANTHER:PTHR11014:SF119	InterPro:Peptidase_M20	InterPro:Peptidase_M20_dimer	SUPFAM:SSF53187	SUPFAM:SSF55031
SignalP:SignalP-noTM	TIGRFAMs:TIGR01891	UniParc:UPI0004EE2517	SEG:seg	:	:

Description

BnaA03g10680D

Coordinates

chrLK031856:+:23883..26395

Molecular Weight (calculated)

48000.6 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.098

Length

439 amino acids

Sequence
(BLAST)

001: MAINNFWIFS LTFQLLLLLH VSSESSLITD DASRRPTKFL EYAKSPEVFD WMVGIRRKLH ENPELGFEEF ETSKLIRSEL DLMGVKYKYP VAVTGVVGYV
101: GTGEPPFVAL RADMDALPMQ EDVEWEHKSK VPGKMHACGH DGHVAMLLGA AKILKEHHQD LQGTVVLIFQ PAEEVFAGAK KMIEAGALKH VEAIFGIHLT
201: NQVPLGKTAS RAGSLLAGSG FFEAVITGKG GHAAIPHHTI DPVIAASSVV LSLQHLVSRE TDPLDSKVVT VSKLHGGNAF NVIPDSITIG GTLRAFSGFS
301: QFQERIKEVI TKQATVNRCN ASVNLKPNGK EPVPPTVNNM NLYKQFKNLV RDLLGEDSFV EVSPIMGGED FSYFAEAIPG HFSFLGMQDE TKRYASPHSS
401: LYTVNEDALP YGAAIHASMA VRYLEDKASK GSDSPKDEL

Best Arabidopsis Sequence Match ( AT5G56660.1 )
(BLAST)

001: MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG
101: TGEPPFVALR ADMDALPIQE GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK MREEGALKNV EAIFGIHLSA
201: RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ
301: LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL
401: YRINEDVLPY GAAIHASMAV QYLKEKASKG SVSGFHEEL

Arabidopsis Description

ILL2At5g56660 [Source:UniProtKB/TrEMBL;Acc:Q5HZ30]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.